Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2367g00007 ATGATCCAAGAACTGTTGGGTGGTGCTAGCCTCATAGCAGGTGAAAGAAAATCCTCCATTAACAACGGAGGAGGAGTTCTACTTCCAAATACACCATCTCCTTGTTCTCTCCCTTCTTCCACAACCAGTGTCACCACCACATCTACAGCTAACACCGCCACCGCAGCCAACACCGCCACCTCAACAACCTCAGATAACCAAAACCTGAGGTGCCCTCGATGTGATTCATCGAACACAAAGTTCTGTTACTACAACAATTACAACCTCACTCAGCCTCGACACTTCTGCAAGACATGTCGCAGGTACTGGACCAAAGGAGGTGCTCTGAGGAACGTTCCCATCGGAGGTGGCTGCCGGAAAAACAAGAACATCGTCGGAACGTCGGCGGCAAAGACTACCACCGCCACCGCGACTAAGATGAAAACTGTGGCATCGGAGCTTGGAAGGTCAGGACTTGGTCCTGGCTTCGAAGTCGAACATGACCTTCCACCAAGCCAAATCCTATGGGGTTCACCACAAAATACTCATCTTCTGGCTTTGCTAAGAGCTAGCCATAGCCAAAACCAAAACCCTAACCCTAACCCTACTCTCATGTCCATCAATGCTGTTATTAAGGAAGATGGGCACTTAATGGGATCCCAATCCCACATGGTGACTGAACCATTAGTTTCAAATGGTTTGTTGAATCCTCGAACCCTAGGCTATGATGCTGTTGGGCAAGTTCCTTCACTTGGTCTATGCAGTTCATTTTGGAGAAATAATCAAGATCAACCTCAACAACAAAATGGAGGGTATGTAATTGGTGAACATCAAAACAGTGGAATTCAAGAACTTTACCAGAAGCTCAGGTTATCATCAACTAATTATTGCAGTGACAACTCACCAGTGTTTATGGGGAACATGGCTTCTAATTCCTCTTCTATATCAAATATTTTGGAGTCAACTTCGGTTGCAGGGGCTGAATTGGGGTACTGGAATCCAACCTTTTCGTGGTCTGATCTTCCAACCACAAATGGTGCATATCCGTAA 1029 0.4626 MIQELLGGASLIAGERKSSINNGGGVLLPNTPSPCSLPSSTTSVTTTSTANTATAANTATSTTSDNQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNIVGTSAAKTTTATATKMKTVASELGRSGLGPGFEVEHDLPPSQILWGSPQNTHLLALLRASHSQNQNPNPNPTLMSINAVIKEDGHLMGSQSHMVTEPLVSNGLLNPRTLGYDAVGQVPSLGLCSSFWRNNQDQPQQQNGGYVIGEHQNSGIQELYQKLRLSSTNYCSDNSPVFMGNMASNSSSISNILESTSVAGAELGYWNPTFSWSDLPTTNGAYP 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2367g00007 342 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 59 269 IPR045174 GO:0003700|GO:0006355
Gabi2367g00007 342 Pfam Dof domain, zinc finger 67 123 IPR003851 GO:0003677|GO:0006355
Gabi2367g00007 342 ProSiteProfiles Zinc finger Dof-type profile. 69 123 IPR003851 GO:0003677|GO:0006355
Gabi2367g00007 342 ProSitePatterns Zinc finger Dof-type signature. 71 107 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2367g00007 Gabi-Chr2367 144540 145899 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2367g00007 30 133 C2C2-Dof Transcription Factor Family AT5G65590 56.731 8.61e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gabi2367g00007 zf-Dof 2.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2367g00007 - - gmx:100800420 421.394