Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl14g00115 ATGGATACTGCTCAGTGGCCACAGGAGATTGGACTGGTGAAACCCATGGAGGATATGGTGTCTAATACATGCTCAAGACCTATGTTAGAGAGAAGGGTAAGGCCTCAGAAAGAACAGGCCTTGAACTGTCCAAGGTGCAATTCAACCAATACCAAATTCTGTTACTACAACAACTACAGTCTCACTCAACCAAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACTGAAGGAGGTTCTCTCAGGAATGTTCCTGTTGGAGGGGGCTCAAGGAAGAACAAAAGATCTTCAACTTCATCATCATCAACTTCATCTTCATCAAAGAAGCCATCTGATCTGACCCCACCGAGCTGTTCACAGTCTTCATCTCAAAACCCTAAGATCCATGAAGGCCAAGATCTCAACCTGGCCTTCCCTACCTCCCAGGATTACCGCACCATCTCTGAATTTGGTGAATTACCCAACATCGAGAACAACAACAACCACCACAATCCTTCTACTTCAGCTTCTCTTTCAGCTCTGGAGCTGCTGAGGACTGGGATTACTTCAAGGGGTCTGAGTTCTTTCATGCCGATGCCGATTCCGGCCGGTTCGACCACAGTCTACCCATCTGGGTTTGCTTTGCAGGATTTCAAACCAACCCTTAATTTTAATGTCGAAGGGCTTGGAGGTGGTTATGGGAGTCTCCAAGGGGTTCAAGAGAGTGCTGGGAGGCTTTTGTTTCCTTTTGAGGATTTGAGACAGGTTTCAAGCACAAATGAATATGAGCAGAATAGAGGACAAGGAGATTCAACTGGGTATTGGAGTGGAATGTTGGGTGGTGGATCATGGTAA 834 0.4628 MDTAQWPQEIGLVKPMEDMVSNTCSRPMLERRVRPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSTSSSSTSSSSKKPSDLTPPSCSQSSSQNPKIHEGQDLNLAFPTSQDYRTISEFGELPNIENNNNHHNPSTSASLSALELLRTGITSRGLSSFMPMPIPAGSTTVYPSGFALQDFKPTLNFNVEGLGGGYGSLQGVQESAGRLLFPFEDLRQVSSTNEYEQNRGQGDSTGYWSGMLGGGSW* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl14g00115 277 Pfam Dof domain, zinc finger 39 95 IPR003851 GO:0003677|GO:0006355
Eupl14g00115 277 ProSiteProfiles Zinc finger Dof-type profile. 41 95 IPR003851 GO:0003677|GO:0006355
Eupl14g00115 277 ProSitePatterns Zinc finger Dof-type signature. 43 79 IPR003851 GO:0003677|GO:0006355
Eupl14g00115 277 MobiDBLite consensus disorder prediction 252 277 - -
Eupl14g00115 277 MobiDBLite consensus disorder prediction 82 136 - -
Eupl14g00115 277 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 30 170 IPR045174 GO:0003700|GO:0006355
Eupl14g00115 277 MobiDBLite consensus disorder prediction 90 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl14g00115 Eupl-Chr14 1540216 1542206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl14g00115 13 277 C2C2-Dof Transcription Factor Family AT3G61850 45.000 2.49e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Eupl14g00115 zf-Dof 2.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl14g00115 - - nnu:104594256 434.106