Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g01357 ATGAGAGCTCAAGTGCAACTTCTTCTTTTCTTCCTCTTCCTTTCTATGATATCTGCAAAGTTCGTAATTGAACCTTGCAACTCCTCGGATTCCTGTAATGCTCTACTCTCCTATGTCCTCCCTTGGGACTCCAAGGTTTCAGAGATTGCGTCAAGGTTCCAAGTCAATATATCCAACATCTTAGGCTCAAATTCGCTCGACCCAACTGAGCCCCTCATTGAGAACCAAATTCTTCCTACCAAATCTCTTATCCAAGTACCCATTTCGTGCCCATGTGTCGATGGCATCCGACGGTCCGTTTCGACAACTTACACTGTTAGAGCAGTCGACACCATCGATTCTATATCAGTCGGTTTTGGTGGACTTGTTAGTCCAGAGCAGATCAGGAGCGTTAATGGGATCTATGGTGGGGATCGACTAGTGACCGGGCAGAGCCTTGTAATTCCGTTACCGTGTACCTGCTTCAACAACAGCAATAACGGAGTTACGGCTGTTTACTTGTCATATGTGGTGCGGAGTGGGGAAAGTTTGAGCAGCATTGGAGCAGCTTACGGTACGACTGTAATGGACCTGGAAGCCGTTAATGCACTGGCACAGGCGGTAGTTGATCCCGGGGACATACTAGCCGTTCCAATTCCAGCGTGTTCATCATCCTCGAACCTGATTTGGTACAATGAGAGTCTAATTGTTCCAAATGGTTCCTATGCTCTAACTGCTAACAACTGTATCAAATGCGCCTGTGGACTAAGCGATCTAAACCTACGCTGTTTTCCGTCCGGTATCGCAATTTCTTGCTCTCATTTGCAGTGCCGTGGGACCAATCTTTTCATAGGTGATGTGTACGAAGTGGAAATGCCAAAAGGCTGCGTTGTTAGTACGTGCACATATCGTGGCCATTCTGGAAAGAAAATTTTTAGAAGTTTAGTAAAATATTCTCAGATTCATTGCACAGGTAACCAGAGTTATTCAACATTGTCGCCTTTCATATCTCCGACATCACATGGTTCTGTAATCCCTTTAATAACCATATCTCCATCTCCAACACCAACACCATCACCATCACCGGCGTCTAATCCATCTGTGACCATTGATGCAATAGAACCTTCCACTAAACAAGATTCCAACATTTCTAGTGACGGGGGATCATTAAAGCATGCTCCATATTGGGTTTATTGTTTATTGAGCTTGTTCTTTCAGCAATTTTGTGTCATTTACTTGAACCATAATTTATGTGTATATTAA 1242 0.4404 MRAQVQLLLFFLFLSMISAKFVIEPCNSSDSCNALLSYVLPWDSKVSEIASRFQVNISNILGSNSLDPTEPLIENQILPTKSLIQVPISCPCVDGIRRSVSTTYTVRAVDTIDSISVGFGGLVSPEQIRSVNGIYGGDRLVTGQSLVIPLPCTCFNNSNNGVTAVYLSYVVRSGESLSSIGAAYGTTVMDLEAVNALAQAVVDPGDILAVPIPACSSSSNLIWYNESLIVPNGSYALTANNCIKCACGLSDLNLRCFPSGIAISCSHLQCRGTNLFIGDVYEVEMPKGCVVSTCTYRGHSGKKIFRSLVKYSQIHCTGNQSYSTLSPFISPTSHGSVIPLITISPSPTPTPSPSPASNPSVTIDAIEPSTKQDSNISSDGGSLKHAPYWVYCLLSLFFQQFCVIYLNHNLCVY* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g01357 413 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 7 320 - -
Eupl11g01357 413 Pfam LysM domain 104 149 IPR018392 -
Eupl11g01357 413 Pfam LysM domain 169 211 IPR018392 -
Eupl11g01357 413 SUPERFAMILY LysM domain 102 150 IPR036779 -
Eupl11g01357 413 ProSiteProfiles LysM domain profile. 167 210 IPR018392 -
Eupl11g01357 413 CDD LysM 168 210 IPR018392 -
Eupl11g01357 413 ProSiteProfiles LysM domain profile. 102 148 IPR018392 -
Eupl11g01357 413 Gene3D LysM domain 157 220 IPR036779 -
Eupl11g01357 413 CDD LysM 102 148 IPR018392 -
Eupl11g01357 413 SUPERFAMILY LysM domain 167 212 IPR036779 -
Eupl11g01357 413 Gene3D LysM domain 99 156 IPR036779 -
Eupl11g01357 413 SMART LysM_2 168 211 IPR018392 -
Eupl11g01357 413 SMART LysM_2 103 149 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g01357 Eupl-Chr11 20572012 20575196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g01357 9 349 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 45.014 2.17e-95 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g01357 - - ming:122062660 459.144