Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl11g00778 ATGTCGGAAACAAAAGATCCGGCGATTAAGTTGTTCGGGAAGACGATTCCGCTGCCGTCGAACGAGGAGTTCCCTGCCTTCTCCGCTGACAGAGGAGGGAGTGAGAGTCCTGATTACGATTCCGATCTTCCTTCGACGAATTCTCTGGAGAAGAAATCCAACAGAGAAGGAGTAGAACTAGAACAAGAACAAACAGCAGATAAGGATCCATTGGGCAGAAAACCAGCCGACAGTACAGAGAAAGATGGAGCATCACCTCCGACTTTGGAAGAACTAACAGATCCTGCTACACCCTCAGGGATTAATGAGAATCCAAAAACGCCCTCTGTTGACAAAGAAACTGCAACAACAAAAACTTCCAAGACCGAAGAAGAACAGAGCGAGACAAGTATCTCACAAGAGAAGACCCTGAAGAAGCCTGACAAGATACTTCCATGTCCCCGCTGTAATAGCATGGACACCAAGTTCTGTTACTACAACAATTACAATGTCAACCAACCCCGGCATTTCTGCAAAAACTGCCAGAGATACTGGACGGCTGGTGGAACCATGAGGAATGTCCCTGTGGGTGCTGGCCGTCGCAAGAACAAGAACACTGCCTCGCATTACCGACACATTGCTGTCTCTGAAGCCCTCCAAAAAGCTCGAACCGATGTCCCAGATGGGATTCATCACCCTGGATTAAAACCCAATGGCACATTCCTCAGCTTCGGCTCAGACGCTCCCCTATGTGAATCCATGGCTTCTGTGTTGAATCTTTCCGAGAAAACAATGCGGAACGACATGCTTAATGGGTTTCATAGACCAGAAGAGCACAGAATTCAAGATTCTTGTGGAAGGGGAGAAAACGGGGATAATAACTCAACCGGGTCTTCTGTCACGGCTTCGAATTCTACAGAGGGAATCAGAGTGGGTTTGCAAGAGCCAATTATGCAGAATTGTCCTGGGTTCCCTCCGCAGATACCATGCTTTCCCGGGCCTCCTTGGGCTTATCCATGGAACTCAGCTCAGTGGAACTCTTCAGTACCTCCAGCTGCTTTCTGTCCTTCTAGCTTTCCTATATCATTCTACCCTGCACCAACTTATTGGGGTTGTGCTGTCCCAGGCACTTGGAACATCCCTTGGTTGTCCCCACCAGCTTCTTCTCTAAACCCTGGAGCCCCAGTCACCACTCCTAGTTCTCCAACCTTGGGGAAGCATTCAAGAGACGGGGACATGCTTAAACCAAGCATTTCAGAGGAAAAGGATCCACTAAGACAGAATTCTGAGAGATGCCTCTGGATGCCAAAGACGTTGAGAATCGATGACCAGGGAGAAGCTGTGAGGAGCTCAATATGGGCCACACTAGGGATTAAGAATGGCAAAGCCGATCCGATAAGCGGGGCAGGGTTATTCAAGGCCTTCCAGTCGAAGGGTGATAAAAAGAATCACATGGACGAAACTTCTCAGGTGTTACAAGCCAATCCTGCAGCCTTGTCTCGGTCTCTCAACTTCCAGGAGAGCTCATGA 1509 0.4884 MSETKDPAIKLFGKTIPLPSNEEFPAFSADRGGSESPDYDSDLPSTNSLEKKSNREGVELEQEQTADKDPLGRKPADSTEKDGASPPTLEELTDPATPSGINENPKTPSVDKETATTKTSKTEEEQSETSISQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNTASHYRHIAVSEALQKARTDVPDGIHHPGLKPNGTFLSFGSDAPLCESMASVLNLSEKTMRNDMLNGFHRPEEHRIQDSCGRGENGDNNSTGSSVTASNSTEGIRVGLQEPIMQNCPGFPPQIPCFPGPPWAYPWNSAQWNSSVPPAAFCPSSFPISFYPAPTYWGCAVPGTWNIPWLSPPASSLNPGAPVTTPSSPTLGKHSRDGDMLKPSISEEKDPLRQNSERCLWMPKTLRIDDQGEAVRSSIWATLGIKNGKADPISGAGLFKAFQSKGDKKNHMDETSQVLQANPAALSRSLNFQESS* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl11g00778 502 PANTHER CYCLIC DOF FACTOR 2 1 502 IPR045174 GO:0003700|GO:0006355
Eupl11g00778 502 MobiDBLite consensus disorder prediction 116 136 - -
Eupl11g00778 502 MobiDBLite consensus disorder prediction 95 115 - -
Eupl11g00778 502 MobiDBLite consensus disorder prediction 52 80 - -
Eupl11g00778 502 Pfam Dof domain, zinc finger 141 198 IPR003851 GO:0003677|GO:0006355
Eupl11g00778 502 MobiDBLite consensus disorder prediction 401 420 - -
Eupl11g00778 502 MobiDBLite consensus disorder prediction 383 420 - -
Eupl11g00778 502 ProSiteProfiles Zinc finger Dof-type profile. 144 198 IPR003851 GO:0003677|GO:0006355
Eupl11g00778 502 MobiDBLite consensus disorder prediction 383 398 - -
Eupl11g00778 502 ProSitePatterns Zinc finger Dof-type signature. 146 182 IPR003851 GO:0003677|GO:0006355
Eupl11g00778 502 MobiDBLite consensus disorder prediction 274 297 - -
Eupl11g00778 502 MobiDBLite consensus disorder prediction 280 297 - -
Eupl11g00778 502 MobiDBLite consensus disorder prediction 472 502 - -
Eupl11g00778 502 MobiDBLite consensus disorder prediction 481 502 - -
Eupl11g00778 502 MobiDBLite consensus disorder prediction 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl11g00778 Eupl-Chr11 9996879 10000826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl11g00778 6 502 C2C2-Dof Transcription Factor Family AT5G39660 43.487 3.79e-111 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Eupl11g00778 zf-Dof 3.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl11g00778 - - ming:122065893 723.391