Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl10g01053 ATGCAAGATCCCACATCTTTTCAACCGATCAATCCCCATTTTGGAGAGCAAGAGCACCTGAAATGCCCACGTTGTGAATCAACGAACACCAAATTCTGCTACTACAACAACTACAACCTCTCCCAGCCCCGCCATTTCTGCAAGAACTGTCGACGCTATTGGACTAAAGGGGGTGCCCTCCGAAACATCCCAGTCGGCGGTGGCAGCCGTAAGAACACAAAGCGTTCATCGAATCCGAAACGCTCTTCTTCTTCTTCCTCCTCTTCGTCATCGTCGTCTTCATCGGTCCAGAATGTGGTTCCAAAGCTTGAACCAAACGGAATTTACGGCCCGGCAGTGACCGGGATGGATCAGGACCGCCGGATGCTCGACATCACGGGAAGTTTCAGCTCTCTGTTGACTTCAAATGGGCAATTTGATAATCTATTCGAGGGTTTGAATCCTACTGGTCCAAGTATTCGGAGGGTACAATTCGGAGAATTCACTGAGCATTCTAATTCAAATTCGATCGAAAACCCGGCATTGGATTTACAGAGCACTAACAATCCAGAGACCTTCTTGGGTGTCCAAGGCGGCGATTCTAGCTGTTGGGGTGGTGGAAATGGGTGGCCTGATCTCGCCATTTACACACCAGGTTCGACCTTTCAATAA 651 0.4916 MQDPTSFQPINPHFGEQEHLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKRSSNPKRSSSSSSSSSSSSSSVQNVVPKLEPNGIYGPAVTGMDQDRRMLDITGSFSSLLTSNGQFDNLFEGLNPTGPSIRRVQFGEFTEHSNSNSIENPALDLQSTNNPETFLGVQGGDSSCWGGGNGWPDLAIYTPGSTFQ* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl10g01053 216 MobiDBLite consensus disorder prediction 69 101 - -
Eupl10g01053 216 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Eupl10g01053 216 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Eupl10g01053 216 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 164 IPR045174 GO:0003700|GO:0006355
Eupl10g01053 216 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Eupl10g01053 216 MobiDBLite consensus disorder prediction 61 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl10g01053 Eupl-Chr10 30385913 30387693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl10g01053 5 143 C2C2-Dof Transcription Factor Family AT1G51700 54.305 4.14e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Eupl10g01053 zf-Dof 2.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl10g01053 - - ming:122064379 321.627