Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl08g00207 ATGGATACTGCACAGTGGCCACAGGAGATTGGACTGGTGAAACCCATGGAAGAGTTGGTTTCTAATACATGTTCTAGGCCTATGTTAGAGAGGAGGGTAAGACCTCAGAAGGAACAAGCTTTGAACTGTCCAAGGTGCAATTCAACCAACACCAAGTTCTGTTACTACAACAACTACAGTCTCACTCAACCCAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACTGAAGGTGGGTCTCTAAGAAATGTTCCTGTTGGAGGAGGTTCCAGGAAGAACAAGAGATCTTCAACTTCATCATCATCATCATCAGCTTCGGCATCGGCTTCTTCAAAGCAGCTACCTGATCTGACCCAACCAAGCTGCTCACAATCTTCATCTCAAAACCCTAAGATCCATGAAGGCCAAGACCTAAACCTAGCTTTCCATACTGGGCCGGATTATCATAATATCTCCGAATTTGCTGAACTACCCAACATCGAGAACAACACCACCAACAACAACAACAACAACAACAATCCTTCTTCTTCTTCTACTTCATCTTCTCTTTCAGCTTTGGAGCTGTTGAGGACTGGGGTTACTTCAAGGGGTCTGAGTTCTTTTATTCCAATGCCGATACCGGATTCACACACGGCCTACCCATCTGGGTTTGCTTTGCAGGATTTCAAACCAACCCTAAATTTTGGTGTGGATGGGCTTGGAGGAGGATATGGGAGTCTTCAAGGGGTTCAAGAGAATGGTGTGAGGCTTTTGTTTCCTTTTGAGGATTTGAGACAGGTTTCAAGCACAACTGAGTTTGAGCAGAATAAGGGACAAGGAGATCCAGCTGGATATTGGAATGGAATGTTGGGTGGTGGATCATGGTAA 867 0.4498 MDTAQWPQEIGLVKPMEELVSNTCSRPMLERRVRPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSTSSSSSSASASASSKQLPDLTQPSCSQSSSQNPKIHEGQDLNLAFHTGPDYHNISEFAELPNIENNTTNNNNNNNNPSSSSTSSSLSALELLRTGVTSRGLSSFIPMPIPDSHTAYPSGFALQDFKPTLNFGVDGLGGGYGSLQGVQENGVRLLFPFEDLRQVSSTTEFEQNKGQGDPAGYWNGMLGGGSW* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl08g00207 288 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 30 175 IPR045174 GO:0003700|GO:0006355
Eupl08g00207 288 ProSiteProfiles Zinc finger Dof-type profile. 41 95 IPR003851 GO:0003677|GO:0006355
Eupl08g00207 288 ProSitePatterns Zinc finger Dof-type signature. 43 79 IPR003851 GO:0003677|GO:0006355
Eupl08g00207 288 MobiDBLite consensus disorder prediction 82 131 - -
Eupl08g00207 288 Pfam Dof domain, zinc finger 39 95 IPR003851 GO:0003677|GO:0006355
Eupl08g00207 288 MobiDBLite consensus disorder prediction 90 131 - -
Eupl08g00207 288 MobiDBLite consensus disorder prediction 160 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl08g00207 Eupl-Chr8 3493801 3496674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl08g00207 13 288 C2C2-Dof Transcription Factor Family AT3G61850 45.317 1.97e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Eupl08g00207 zf-Dof 3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl08g00207 - - nnu:104594256 432.18