Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00990 ATGCTGGGTAACTGTGAGAAGATGGTCATCTCTTCTACTAAGGAATGGCCACAGATAGATGAGACGGAGCTGATGGGTTCAAGTGGTATGGTTATGGAGAAAGCAAGCCAAACCCAAGAGCAAGCACTCAAGTGCCCTCGTTGTGATTCCTCAAACACCAAGTTTTGTTACTACAACAACTACAGCTTATCTCAACCTCGCCATTTCTGCAAGGCTTGCAAGCGTTACTGGACTAGAGGTGGAACGTTACGCAACGTTCCCGTCGGTGGTGGGTGTAGAAAGAACAAGAGGATCAAGAGGCCTACAGCTGCAGCGTCCTCCGATCCTCCTCCTTCATCACTGCCTACACCTACACCGACGAATCCTTCTCACCAGATCGATGTTTCTACTGGCTCTAGCCACATTAATTCGTTGTTTTATGGCTTACCCAGTAACCCTTCTGATCTTTCTCTTACGTTTCCGAGGTTTCATTCAAGAGTTTCTAACATGGAAACAATACCCACTTCTTCAAGCTATGATCTCCAGCCTCAATTTAATGGTTTGGGATTGGGTTTTTCGTCTGCTACCATGACTAGTGATGCACGTGATGAAGATTACCGAAGTGGGTATCATCCTTCCTCTCAAATCCATGATGTGGTTACTTCGAATTCACTTCTTTCAAACTTTTCACTCCTTGGAGCTCCATCTTCTACTTCCAAGATGATTTTGGGTGGTTTGAAGGAAACTGCACCCAGTAATAATTATTTTCAGCCATTAACACCCTTTGAAGGTCTGCAACTTGCGGGGAACGGAGATCACGGGATGGTTATGAAAGAAGTGAAAATGGAAGATGGAAGCAATCGAATGAGCAGCAACAAGTTGGAATGGAGCCAGAATCCGATTGACCAAATTGCTTCCTTGGATTCGTCTCTTTATTGGAGTGCGACTACTGTTGGTTCTTGGCCTGATCTCCCCAACTATGGATCTTCGGTCACTCCTCTGATCTAA 987 0.4529 MLGNCEKMVISSTKEWPQIDETELMGSSGMVMEKASQTQEQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRIKRPTAAASSDPPPSSLPTPTPTNPSHQIDVSTGSSHINSLFYGLPSNPSDLSLTFPRFHSRVSNMETIPTSSSYDLQPQFNGLGLGFSSATMTSDARDEDYRSGYHPSSQIHDVVTSNSLLSNFSLLGAPSSTSKMILGGLKETAPSNNYFQPLTPFEGLQLAGNGDHGMVMKEVKMEDGSNRMSSNKLEWSQNPIDQIASLDSSLYWSATTVGSWPDLPNYGSSVTPLI* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00990 328 ProSitePatterns Zinc finger Dof-type signature. 45 81 IPR003851 GO:0003677|GO:0006355
Eupl06g00990 328 ProSiteProfiles Zinc finger Dof-type profile. 43 97 IPR003851 GO:0003677|GO:0006355
Eupl06g00990 328 MobiDBLite consensus disorder prediction 88 128 - -
Eupl06g00990 328 Pfam Dof domain, zinc finger 41 97 IPR003851 GO:0003677|GO:0006355
Eupl06g00990 328 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 33 207 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00990 Eupl-Chr6 16149641 16151659 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00990 1 328 C2C2-Dof Transcription Factor Family AT1G28310 35.027 1.74e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Eupl06g00990 zf-Dof 1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00990 - - nnu:104599432 404.831