Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00873 ATGGCGTACGTCTCTGTCACATGGCGTTATGAATTTTATGATACGTGTCAAACTATCTACTATATATACAAGCATTCCCATGGTCTCCTTGCCTCCTTCATACTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGCTATGGCTGATATCGGCGACGGCCGAGACGCACCGGGGTTCAAGCTTTTCGGCACGACCATTCTGGTGGAGATAAAACAAGGCAAGGAGAAGAAGACGGTGACAGCGGGTGTCGGGTTGGAAAAGAGATCCGATAAGACGATTCCATGCCCGAGATGCAAAAGCATTGAGACCAAGTTCTGTTACTTCAATAACTACAATGTCAAACAACCTCGCCATTTCTGTAAGGGCTGCAAGAGGTACTGGACTGCTGGTGGAACCCTCAGGAATGTACCGGTTGGATCTGGACGCCGCAGACCCAAGCCATCGTGTCATGGGTCGATCGGGTTGGACAAATTTGAGCTGGAGCAGTGGCTTATTGCAGCCTCAAAAGGCGGTTTCTGGCATGTTTTACCGGCGAAGAGGCGGAGCAACGCCTCAGCTGGTCAAATATGTTGA 582 0.4966 MAYVSVTWRYEFYDTCQTIYYIYKHSHGLLASFILSLSLSLSLSLSLYAMADIGDGRDAPGFKLFGTTILVEIKQGKEKKTVTAGVGLEKRSDKTIPCPRCKSIETKFCYFNNYNVKQPRHFCKGCKRYWTAGGTLRNVPVGSGRRRPKPSCHGSIGLDKFELEQWLIAASKGGFWHVLPAKRRSNASAGQIC* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00873 193 Pfam Dof domain, zinc finger 94 149 IPR003851 GO:0003677|GO:0006355
Eupl02g00873 193 PANTHER CYCLIC DOF FACTOR 2 88 151 IPR045174 GO:0003700|GO:0006355
Eupl02g00873 193 ProSitePatterns Zinc finger Dof-type signature. 98 134 IPR003851 GO:0003677|GO:0006355
Eupl02g00873 193 ProSiteProfiles Zinc finger Dof-type profile. 96 150 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00873 Eupl-Chr2 11511711 11512829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00873 57 193 C2C2-Dof Transcription Factor Family AT1G29160 47.701 3.72e-45 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Eupl02g00873 zf-Dof 3.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00873 - - ming:122060202 199.134