Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01757 ATGGTTTTCACGTCGGTCTATCTAGATCCACCAAACTGGCAGCAGCCACCAAATCATCAACCAGGAAATAGTAGTGAGAATCCCCAGATTCCGCTTCCACCACAGCCTCCGGCTGGTGGCAGCCCGGGGTCGATCAGGCCTGGTTCGATGGCCGATCGAGCCCGGCTAGCCAAGGTACCGCAGCCGGAGGCAGCACTGAAATGCCCACGATGCGAATCGACCAATACAAAGTTCTGCTACTTCAATAATTACAGTCTCTCGCAGCCTCGCCACTTCTGCAAGACCTGTCGACGATACTGGACAAGAGGGGGAGCCCTGAGGAGCGTTCCGGTGGGCGGTGGCTGTCGTAGGAACAAGAGAAGCAAAGGCAGCAGCTCAAAATCTCCAGTTACTGCCGACCGCCAAACAGTTCCTGGTTCCACAAGTTCAGTTCCATCCAATAGCTTCACCACTGATATCATGGGTCATATGCCGCCTCCACCACCGTCACAATTACCCTTCATGGCCTCTTTACATCATTTTACTGACTATGGTACATCGGACATGGGCTTGAATTTTAATGGAACTCAGCCACCGATGGTGCCAATAGGTGGTGGTGGCGGGACCGATATGGATTTCCAGATGGGAAATAGTTCAGGTTGTAGTGGAACCATTTTATCCACCGGAGGAGCCGAGCAGTGGAGACTGCCGCAAGTGCATCAATTCCCTTTCATGGCTGGTTTGGAGCCACCCGCAGGATTATACCCATTTGAAGGAGAAGGTGTTGAGCCACGAGCTTACGCGGCTGAAGCTGGTCAGCTTCGGGGCAAGCCATCCGGTTCCATGGTTACTCAGCCAGCTTCAGTGAAAATGGAAGAGACTCAAGGGATGAATTTATCAAGGCACTTTTTGGGTATTCCTGGAAATGATCAATACTGGGGTGCCAATGCATGGACAGATCTCTCCGGTTTCACCTCCTCTTCCACCGGCCATCTCTTGTAA 981 0.524 MVFTSVYLDPPNWQQPPNHQPGNSSENPQIPLPPQPPAGGSPGSIRPGSMADRARLAKVPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSKGSSSKSPVTADRQTVPGSTSSVPSNSFTTDIMGHMPPPPPSQLPFMASLHHFTDYGTSDMGLNFNGTQPPMVPIGGGGGTDMDFQMGNSSGCSGTILSTGGAEQWRLPQVHQFPFMAGLEPPAGLYPFEGEGVEPRAYAAEAGQLRGKPSGSMVTQPASVKMEETQGMNLSRHFLGIPGNDQYWGANAWTDLSGFTSSSTGHLL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01757 326 MobiDBLite consensus disorder prediction 27 41 - -
Eupl01g01757 326 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 53 186 IPR045174 GO:0003700|GO:0006355
Eupl01g01757 326 MobiDBLite consensus disorder prediction 8 26 - -
Eupl01g01757 326 ProSitePatterns Zinc finger Dof-type signature. 68 104 IPR003851 GO:0003677|GO:0006355
Eupl01g01757 326 MobiDBLite consensus disorder prediction 1 61 - -
Eupl01g01757 326 MobiDBLite consensus disorder prediction 124 151 - -
Eupl01g01757 326 MobiDBLite consensus disorder prediction 107 151 - -
Eupl01g01757 326 ProSiteProfiles Zinc finger Dof-type profile. 66 120 IPR003851 GO:0003677|GO:0006355
Eupl01g01757 326 Pfam Dof domain, zinc finger 65 120 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01757 Eupl-Chr1 39262048 39263714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01757 29 325 C2C2-Dof Transcription Factor Family AT3G55370 43.125 5.64e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Eupl01g01757 zf-Dof 4.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01757 - - nnu:104594562 495.738