Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph3g0808 ATGGCAACTCTGCTGAATACAGCGTCTTCACCTGCAAACCTATCATCAAAAACAAAAGGGAGCTGTTGTAGTTTTTTTAGCCTGTATTCCCAGATTCTAAACATCCAAAGTGTTTCCCCCAAAAGGGATTTTCCCAGAGTTTTGGCTTCTTCCCAGATTACTATTTCTTCAAAGAATGCTGTTATTACTCTGCCTAACTGGAGGGTGGGGAAGAATGATCCAAAAAGTCAGGAGCTCAGGCTCAATGATGCATTTCAGTATTTGGAGTATATGGTGCGCAAAGGCCAGAAGCCTGATGTAGCTCAAACGACGCAGCTTTTGTATGATCTTTGCAAGTTTAATAAACAAAAAAAAGCTGTTAGAGTGATGGAGATGATGGTGGGTTCAGGTATTATACCTTATGCAGCATCGTGTACATATTTGATCAATAATTTGTGCAAGAGAGGGAATGTTGGGTATGCCATGCAATTGGTTGAAAAGATGGAGGAACATGGGTTTCCAATTAATACCATCACCTATAATACTCTAGTTAAAGGGCTTTGCATGCAGGGAAATTTAAACAAGAGCTTGCAGCTTATAGATAGATTAACAAAGAAGGGATTGGTCCCAAACGCATTCACATATTCTTTCTTGCTTGAAGCTGCTTATAAGGAAATGGGAGTAGATGAAGCCATGAAACTTTTAGATGAAATAATTGCTAAAGGTGGGGAGAGGAATTTGATTAGTTACAATGTTATATTAACTGGGTTGTGCAAGGAAGGTAGAACTGAAGAAGCCTTTAAGCTATTCAAGGAATTGCCTGAAAAGGGGTTTAATCCTAGTGTTGTGAGTTATAACATTTTGCTGAGGAATTTGTGTGACGAAGGGCGGTGGGATGAGGCAAATGAGCTATTGGCAGAGATGTATGAAGAGGATCTGTCTCCCTCTGTGGTTACCTACAACATATTAATTACTTTCCTTGCCGTCCATGGAAGAACAGAACATGCTTTCAAGGTGTTGGATGAAATGATAAGGAGTGGATTTAAGGCAACTGCCACTAGCTATAATCCAATTATTGCTTATCTCTGCAAGGAAGGGAAGGTTGATCTTGTAGTTCAGTGTCTAGACCAAATGATTTACCGGTACTGTAGTCCTAACGAAGGAACATATAATGCTATTGCTTTGCTTTGTGAGAAAGGTAAAGTGCAAGAGGCATTCTCCATTATCCAAAGCTTGGGTAATAAACAAGACTCCCCTATGCATGATTTCTATAAAAATGTTATTTGGAGCATGTGTAGGAAAGGGAACACATATCCAGCCATTCAAATAATATATGAAATGACAAAGTATGGATTTACACCAGATTCATATACTTACTCGTCTTTGATTAGAGGAATGTGTAGGGAAGGAATGTTCAATGGAGCTATTGAGATATTCGGGGTTTTGGAAGAAAATGGGTACAAGCCTGATATTGATAACTATAATGCACTTTTATTTGGCTTCTGTAAATCTCTTAGAACCGACTTGTCAATGGAGATATTTCAGGTGATGATTGATAAAGGATGTATGCCTAACGAGACAACTTATACCATTCTCATTGAAGGGCTTGTTTTTGAAGAAGAAATGGATATGGCATCCCAGCTTTTGAAAGAGTTGCATCAAAAGGAAGTATTGAGCCAAAGTGCTGTAGAGAGACTTGTTATGCAGTTTGACCTCAAGGATTTGGCAGATTAG 1713 0.3888 MATLLNTASSPANLSSKTKGSCCSFFSLYSQILNIQSVSPKRDFPRVLASSQITISSKNAVITLPNWRVGKNDPKSQELRLNDAFQYLEYMVRKGQKPDVAQTTQLLYDLCKFNKQKKAVRVMEMMVGSGIIPYAASCTYLINNLCKRGNVGYAMQLVEKMEEHGFPINTITYNTLVKGLCMQGNLNKSLQLIDRLTKKGLVPNAFTYSFLLEAAYKEMGVDEAMKLLDEIIAKGGERNLISYNVILTGLCKEGRTEEAFKLFKELPEKGFNPSVVSYNILLRNLCDEGRWDEANELLAEMYEEDLSPSVVTYNILITFLAVHGRTEHAFKVLDEMIRSGFKATATSYNPIIAYLCKEGKVDLVVQCLDQMIYRYCSPNEGTYNAIALLCEKGKVQEAFSIIQSLGNKQDSPMHDFYKNVIWSMCRKGNTYPAIQIIYEMTKYGFTPDSYTYSSLIRGMCREGMFNGAIEIFGVLEENGYKPDIDNYNALLFGFCKSLRTDLSMEIFQVMIDKGCMPNETTYTILIEGLVFEEEMDMASQLLKELHQKEVLSQSAVERLVMQFDLKDLAD 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph3g0808 570 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 309 343 IPR002885 -
Enph3g0808 570 Gene3D Tetratricopeptide repeat domain 75 184 IPR011990 GO:0005515
Enph3g0808 570 Gene3D Tetratricopeptide repeat domain 185 290 IPR011990 GO:0005515
Enph3g0808 570 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 239 273 IPR002885 -
Enph3g0808 570 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 344 378 IPR002885 -
Enph3g0808 570 SUPERFAMILY TPR-like 122 402 IPR011990 GO:0005515
Enph3g0808 570 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 274 308 IPR002885 -
Enph3g0808 570 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 448 482 IPR002885 -
Enph3g0808 570 NCBIfam pentatricopeptide repeat 241 274 IPR002885 -
Enph3g0808 570 NCBIfam pentatricopeptide repeat 450 484 IPR002885 -
Enph3g0808 570 NCBIfam pentatricopeptide repeat 311 344 IPR002885 -
Enph3g0808 570 NCBIfam pentatricopeptide repeat 137 169 IPR002885 -
Enph3g0808 570 NCBIfam pentatricopeptide repeat 171 205 IPR002885 -
Enph3g0808 570 NCBIfam pentatricopeptide repeat 487 519 IPR002885 -
Enph3g0808 570 NCBIfam pentatricopeptide repeat 276 309 IPR002885 -
Enph3g0808 570 NCBIfam pentatricopeptide repeat 347 376 IPR002885 -
Enph3g0808 570 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 77 429 - -
Enph3g0808 570 Gene3D Tetratricopeptide repeat domain 426 567 IPR011990 GO:0005515
Enph3g0808 570 Gene3D Tetratricopeptide repeat domain 294 425 IPR011990 GO:0005515
Enph3g0808 570 Pfam PPR repeat 137 166 IPR002885 -
Enph3g0808 570 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 134 168 IPR002885 -
Enph3g0808 570 Coils Coil 561 570 - -
Enph3g0808 570 Pfam PPR repeat family 482 529 IPR002885 -
Enph3g0808 570 Pfam PPR repeat family 169 214 IPR002885 -
Enph3g0808 570 Pfam PPR repeat family 417 461 IPR002885 -
Enph3g0808 570 Pfam PPR repeat family 239 286 IPR002885 -
Enph3g0808 570 Pfam PPR repeat family 308 349 IPR002885 -
Enph3g0808 570 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 483 517 IPR002885 -
Enph3g0808 570 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 169 203 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph3g0808 78 550 Glycosyltransferase AT1G05670 25.988 1.80e-50 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph3g0808 3 29385675 29387387 Enph3g0808 3 29385675 29387387 ECH