Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph3g0649 ATGTCTCTTCCACAAAGGCCTATTCTTTCCCTTGTCCTCATCATACTCTCATTAGGGTTTTGTTTTGGCTCTTGCAAGGATGCTCCAAAACATACCCATTTTAGCCTCATTACAAGAAAGTCCATGCCTGCCAAATACTACTTTAAAGTTTGTGAAAGCTGTGATTTTTTTCCTGGTTCATCATGTCAGCTCTATGGAACGATCAAAGCATGGCCTGACATGTCACTATATGAAGAAGATGGAAGTCACTGGATTCTCTTTGATAAGATCACAGATTTCAAAGTTGATGGTTTTGGCAATGGCACCTTCAATGGCAATGGCTGGATATGGTGGCAGAAATCTTGCAAAGTCGACAGAAGCCTTGCTGTGACTTTCAACGATTGCAACAAGTTGATAGTGCAAAACCTGACGTTCACAAATCCACCACAAATGCATCTGAACTTCGAGAATTGTTTCAATGTTGCTGTTTCAAATCTCAAAGTGAGAGCACCAGGACACAGCCCTAATACTGATGGGATTCATGTGGCAGGGACAGAGAATATTTCTATAAGCAACAGTACTATTGGCACAGGTGATGACTGCATTTCAATAGTAAGCGGATCTAGAAATGTTAAAGCTACAGACATAATCTGTGGACCAGGACATGGAATCAGTATTGGGAGCCTGGGGGCTAATAACTCAGAAGCTCAAGTGTCGAATGTGTCTGTGAACAGAGTAAAATTGAAAGGAACCACTAATGGGGTGAGAATAAAGACTTGGCAGGGAGGATCTGGTTTTGCAAGGAACATCAGGTTCACAAATATAAAAATGAGAAATGTAAGCAACCCCATCATCATAGATCAAAACTACTGTGATCAAAACGAACCATGCCAGGAGCAGGAATCAGCAGTGGAACTGAGCAATGTGATGTATCAAAACATAAGAGGAACAAGTGCATCAGAAGTTGCCATCAGAATAGATTGCAGCAGAACAGTGCCATGCAGAAACATTTACATGAATAATGTGTCCATAGAAGCTGAAGGAAAAGGAGAGGCCATTGCATTATGTGATAATGTTGGATATGTCAATACAACAATGCTTACCCCTCAGTGTGAGAGGATTCATGCTTCATTGGGTTAA 1119 0.4111 MSLPQRPILSLVLIILSLGFCFGSCKDAPKHTHFSLITRKSMPAKYYFKVCESCDFFPGSSCQLYGTIKAWPDMSLYEEDGSHWILFDKITDFKVDGFGNGTFNGNGWIWWQKSCKVDRSLAVTFNDCNKLIVQNLTFTNPPQMHLNFENCFNVAVSNLKVRAPGHSPNTDGIHVAGTENISISNSTIGTGDDCISIVSGSRNVKATDIICGPGHGISIGSLGANNSEAQVSNVSVNRVKLKGTTNGVRIKTWQGGSGFARNIRFTNIKMRNVSNPIIIDQNYCDQNEPCQEQESAVELSNVMYQNIRGTSASEVAIRIDCSRTVPCRNIYMNNVSIEAEGKGEAIALCDNVGYVNTTMLTPQCERIHASLG 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph3g0649 372 Pfam Glycosyl hydrolases family 28 61 353 IPR000743 GO:0004650|GO:0005975
Enph3g0649 372 SUPERFAMILY Pectin lyase-like 63 365 IPR011050 -
Enph3g0649 372 PANTHER - 55 352 - -
Enph3g0649 372 Gene3D - 24 352 IPR012334 -
Enph3g0649 372 SMART pbh1 151 177 IPR006626 -
Enph3g0649 372 SMART pbh1 231 252 IPR006626 -
Enph3g0649 372 SMART pbh1 201 221 IPR006626 -
Enph3g0649 372 SMART pbh1 178 199 IPR006626 -
Enph3g0649 372 SMART pbh1 260 281 IPR006626 -
Enph3g0649 372 ProSitePatterns Polygalacturonase active site. 208 221 IPR000743 GO:0004650|GO:0005975
Enph3g0649 372 FunFam Pectin lyase-like superfamily protein 200 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph3g0649 Enph-Chr3 27478847 27481388 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph8g1403 8 23025852 23027085 Enph3g0649 3 27478847 27481388 CCT
Enph3g0649 3 27478847 27481388 Enph3g0649 3 27478847 27481388 ECH