LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph13g0587	ATGGCTATTCCTTATCCCCATTTTATTGCGCCGGAGAAGGCAGCCATGGAGACGAGTCTCTTGGTGCCTTCATCACCGTCGTCATCTCTATCTCCTCCTCATGTGACTTTAACACAGGACGAATTGAAGAAAATCGCCGCCTATAAAGCCGTTGAGTTCGTCGAATCTGGCATGGTTCTGGGTTTGGGAACTGGGTCCACGGCGAAGCACGCAGTGGACCGAATCGGCGAGCTTTTGCTTCAAGGGCAGCTCAAGAACATTATAGGAATACCCACGTCGAAGAAGACCCACGAGCAGGCGGTTTCCTTGGGGATTCCGTTGTCGGATCTCGACTTGCACCCAAATGTGGATCTTGCGATTGACGGAGCAGATGAAGTCGATCCTTATTTGAACTTAGTGAAAGGGCGAGGTGGATCGCTTCTGAGAGAAAAAATGATTGAGGGTGCTTGCAAGAAGTTCATTGTTATTGTAGATGAGTCCAAGTTGGTGAAGTATCTGGGAGGTAGTGGACTAGCCATGCCTGTTGAGATTATACCCTTTTGCTGGAAGTTCACTGCTGATAGGCTGCAAAAATTGTTTGAGGAGTCAGACTGTGTTGCTAAACTGAGGACTTTTGAAGAGAAAGATGAACCATTTGTAACTGACAATGGAAATTACATCGTAGACTTGTATTTTAACAAGAGCATTGGTGATCTGAAGGCAGCCAGTGATGCAATTCTTCAGCTTGCTGGTGTTGTGGAGCATGGAATGTTTCTGGACATGGCCTCTACAGTCATTATTGCTGGTGAATTTGGGATAACCGTGAAAAATAAGTTTATTATGTCTTATAAAATGTACTCTACCTCACGTCTTGCTGAAAGCTTTCCTGGAAAAGCTCAAGGGGTGAAATTCACTGCTCCTGCTGATGATGACGATGACCTTGATCTCTTTGGTGAAGAGACAGAGGAGGAAAAGGCAGTAGCAGAGGCAAGGGAGGCTACTAAAAAGGAATCCTCCGAGAAGAAAGAGAGTGGGAAGTCCTCTATTCTGCTTGATGTGAAGCCTTGGGATGATGAGACAGAAATGAAGAAGCTGGAAGAGGCTGATGTGCCGTTGAGATAA	1101	0.4596	MAIPYPHFIAPEKAAMETSLLVPSSPSSSLSPPHVTLTQDELKKIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLLQGQLKNIIGIPTSKKTHEQAVSLGIPLSDLDLHPNVDLAIDGADEVDPYLNLVKGRGGSLLREKMIEGACKKFIVIVDESKLVKYLGGSGLAMPVEIIPFCWKFTADRLQKLFEESDCVAKLRTFEEKDEPFVTDNGNYIVDLYFNKSIGDLKAASDAILQLAGVVEHGMFLDMASTVIIAGEFGITVKNKFIMSYKMYSTSRLAESFPGKAQGVKFTAPADDDDDLDLFGEETEEEKAVAEAREATKKESSEKKESGKSSILLDVKPWDDETEMKKLEEADVPLR	366

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph13g0587	366	FunFam	Ribose-5-phosphate isomerase A	42	175	-	-
	Enph13g0587	366	Gene3D	-	332	362	IPR014717	-
	Enph13g0587	366	SUPERFAMILY	D-ribose-5-phosphate isomerase (RpiA), lid domain	171	252	-	-
	Enph13g0587	366	MobiDBLite	consensus disorder prediction	315	343	-	-
	Enph13g0587	366	CDD	RPI_A	42	262	IPR004788	GO:0004751\|GO:0009052
	Enph13g0587	366	ProSitePatterns	Elongation factor 1 beta/beta'/delta chain signature 1.	303	311	IPR001326	GO:0003746\|GO:0005853\|GO:0006414
	Enph13g0587	366	SUPERFAMILY	NagB/RpiA/CoA transferase-like	38	186	IPR037171	-
	Enph13g0587	366	SUPERFAMILY	eEF-1beta-like	336	361	IPR036219	-
	Enph13g0587	366	NCBIfam	ribose 5-phosphate isomerase A	42	265	IPR004788	GO:0004751\|GO:0009052
	Enph13g0587	366	Gene3D	-	165	249	-	-
	Enph13g0587	366	Gene3D	-	42	263	-	-
	Enph13g0587	366	Pfam	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)	89	263	IPR004788	GO:0004751\|GO:0009052
	Enph13g0587	366	Hamap	Ribose-5-phosphate isomerase A [rpiA].	39	269	IPR020672	GO:0004751\|GO:0009052
	Enph13g0587	366	PANTHER	RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED	28	271	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph13g0587	Enph-Chr13	12180695	12182363	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph13g0587	272	361	Eukaryotic Initiation Factors Gene Family	AT5G12110	52.252	7.28e-17	77.0

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Enph13g0587	13	12180695	12182363	Enph13g0587	13	12180695	12182363	ECH