Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g1159 ATGAGAAATCTCATTCAGTTTCTGTTAGGCCTCGCACACTTCAGCATCCTCTGCCTCGTGCAAACCAAATCCATCATCGAGCCATGCGCCTCCTCAGACGCCTGCCCTTCCCTCCTCTCCTTCGTCCTCCCCTGGGACTCCAAGCTCTCCGAAATCGCATCACGCTTCCAGGTAAACGTCTCCGACATACTTGCCGCCAACTCCGTCTTCCCGGTATCACAAACCATGGCCGATCACATCATCAGATCCAAATCCGTGGTGAAGATCCCGAACTCGTGCCCTTGCGTGGACGGAATTCGAAGATCGATGTCCACAATGTACACCGTGCAAGCATCAGACACATTGGAAACCATATCTCAGGGGTACGGGGGGCTGGTGAGCGGAGACCAAATCGCCACCGCGAACAGCATAAATGCGACGAATCGTTTAACGAACGGAGGGAGGTTAGTGATACCATTGCCGTGTACGTGTTTGAATAACGTGAGGAATGGCGAAACGACAGTGTACATGTCGTATGTGGTGAAGAAGGGAGAGAGCTTGAGGAGCATAGCGATGGGTAGGAGAACGACAGTTTCAGAGTTGGAGGTTATCAATGGATTGAATCAGGACGCGGTGGAGGCGGGAGACGTGATAGCTCTTCCCATTGCAGCATGTTCTTCAGCAACTCTGAATTGGTACAACGAGAGTCTCATCGTCCCGAATGGTTCATATGCTCTTACTGCCTCCGACTGTATCAAATGCTCTTGTGGCCCCATTGATCTTAGGCTGCAGTGTTATCCATCTGGATTGGAAGTTCCCTGCTTCAATCTTCAGTGCAAAGATTCCAACCTAGTGATTGGGGATGAATATGTCACTTTTTCAAATTCAGGTTGTAACGTGACTCAGTGTCTTTATCGTGGTCACAGAGGTGGTAAGATTCTAAGAAGGTACATATTACGCTTTCACCAGTCAAATCCTTTAAATTTATATGAAGAAGAATATATAGGTTAG 990 0.4859 MRNLIQFLLGLAHFSILCLVQTKSIIEPCASSDACPSLLSFVLPWDSKLSEIASRFQVNVSDILAANSVFPVSQTMADHIIRSKSVVKIPNSCPCVDGIRRSMSTMYTVQASDTLETISQGYGGLVSGDQIATANSINATNRLTNGGRLVIPLPCTCLNNVRNGETTVYMSYVVKKGESLRSIAMGRRTTVSELEVINGLNQDAVEAGDVIALPIAACSSATLNWYNESLIVPNGSYALTASDCIKCSCGPIDLRLQCYPSGLEVPCFNLQCKDSNLVIGDEYVTFSNSGCNVTQCLYRGHRGGKILRRYILRFHQSNPLNLYEEEYIG 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g1159 329 Gene3D LysM domain 101 159 IPR036779 -
Enph12g1159 329 ProSiteProfiles LysM domain profile. 105 151 IPR018392 -
Enph12g1159 329 CDD LysM 107 151 IPR018392 -
Enph12g1159 329 ProSiteProfiles LysM domain profile. 170 213 IPR018392 -
Enph12g1159 329 SUPERFAMILY LysM domain 170 214 IPR036779 -
Enph12g1159 329 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 9 307 - -
Enph12g1159 329 SMART LysM_2 106 152 IPR018392 -
Enph12g1159 329 SMART LysM_2 171 214 IPR018392 -
Enph12g1159 329 SMART LysM_2 49 90 IPR018392 -
Enph12g1159 329 SUPERFAMILY LysM domain 105 153 IPR036779 -
Enph12g1159 329 Gene3D LysM domain 160 224 IPR036779 -
Enph12g1159 329 CDD LysM 171 213 IPR018392 -
Enph12g1159 329 Pfam LysM domain 172 214 IPR018392 -
Enph12g1159 329 Pfam LysM domain 49 90 IPR018392 -
Enph12g1159 329 Pfam LysM domain 107 152 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g1159 Enph-Chr12 18478472 18482725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph12g1159 23 307 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 45.993 1.94e-78 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g1159 - - aprc:113855794 431.409