Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1714 ATGGTTTTCCCTTCTATTCGAGTCTATTTAGATCCTCCCAATTGGCAGCAGGAACCAAATCAACACCAAGCAAATGGAAGCACTGATGAGAGTGCTCATCAGCTTCTTCCACCGCTACCACCACAAGCACAGGGCCCTCAAGTGGGCTCAATCAGGCCCGGGTCCATGTCAGATCGGGCCCAAGTAGCGAAGATACCACCACCACCTGCAGAGGCAGCAGCACTGAAGTGCCCTCGGTGTGAATCCACCAACACGAAGTTCTGCTACTTCAACAACTACAGCCTCTCTCAGCCGCGGCACTTCTGCAAGACTTGTAGGCGTTACTGGACAAGAGGGGGTGCTCTAAGGAACGTTCCTGTTGGTGGAGGCTGCCGCAGAAACAAGAAGAGCAAGAGGGGTCGCTCCAAGTCTCCAGCAGCACCTACCACTGAAAAACACTCACCACTTCCCAATTCAGCAAGTGCAGTAGCAGTGGTGCCTTCAGGTGCCACCTGTCATGAGCTCATTGGCCAGTTCCCGCAACCAAGTAACCGGAGTTTCATGGCGTCTCTTCAGAATATAAGCCGCTATGGTTCCGTGGGAAACACGGGACAGACTGAACATATGGGGTTTCCAATTGGGGGAGGAGTGGAACAGTGGCGGTTGCAGCAGTTTCCTAGTTTCTTGAGTGGTTTTGAGTCAGCTGTTTCTTCTGCTTCGTACCCTTTTCAAAGTGATCAAGGTGTTGAAGCGGTTTCAGCTGGTTTGATTGGACTTGGAGATATGGGAGCGAGTTCTAGGGTTACTCAGATTCCACCGGTTAAATTGGAAGGAAGCGGAGGTCTAAATTTGATAAGATCCCCACTGAGTGGCTCTCATGAGAATAACCAATACTATTCATGGACTGATTTATCAGTTGGGTATAAAATTTTCTCCCAAATTCTATCTGCTTCGTCGTTCTTGGTCGCTCACACTAGTGCGTGTTTTAAGTTTTCGCCCACGTATGACGATGGGCTAGCACGGTAA 1005 0.4995 MVFPSIRVYLDPPNWQQEPNQHQANGSTDESAHQLLPPLPPQAQGPQVGSIRPGSMSDRAQVAKIPPPPAEAAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKSKRGRSKSPAAPTTEKHSPLPNSASAVAVVPSGATCHELIGQFPQPSNRSFMASLQNISRYGSVGNTGQTEHMGFPIGGGVEQWRLQQFPSFLSGFESAVSSASYPFQSDQGVEAVSAGLIGLGDMGASSRVTQIPPVKLEGSGGLNLIRSPLSGSHENNQYYSWTDLSVGYKIFSQILSASSFLVAHTSACFKFSPTYDDGLAR* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1714 334 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 5 298 - -
Dod10g1714 334 MobiDBLite consensus disorder prediction 14 32 - -
Dod10g1714 334 MobiDBLite consensus disorder prediction 136 150 - -
Dod10g1714 334 MobiDBLite consensus disorder prediction 12 63 - -
Dod10g1714 334 Pfam Dof domain, zinc finger 74 129 IPR003851 GO:0003677|GO:0006355
Dod10g1714 334 MobiDBLite consensus disorder prediction 119 151 - -
Dod10g1714 334 ProSiteProfiles Zinc finger Dof-type profile. 75 129 IPR003851 GO:0003677|GO:0006355
Dod10g1714 334 ProSitePatterns Zinc finger Dof-type signature. 77 113 IPR003851 GO:0003677|GO:0006355
Dod10g1714 334 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 298 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1714 Dod-Chr10 38277341 38279632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1714 1 131 C2C2-Dof Transcription Factor Family AT2G37590 58.108 3.64e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod10g1714 zf-Dof 1.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1714 - - gmx:100816635 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1714 10 38277341 38279632 Dod10g1714 10 38277341 38279632 ECH
Dod10g1714 10 38277341 38279632 Dod03g2923 03 61433052 61434912 PCT