Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1649 ATGAAACACATTGCTCAGATCAATTCATCAGCTGAGGAAAAATTGTTGTTTGTTCAGCCTCAACAATTAATTAATTTTATGTTCACTGATTCGATTCTGTGTATGATTATTATATTGTTGTTGCAGCAAATGTCTAGCCAGTCACTGGAGAACATGATAGCTTGCTCAAAAGGTCAGCAGGACAAGAAACCAAGGCCTCAGCCACCAGAACAAGCTCTCAAGTGCCCAAGATGTGACTCCACCAACACCAAATTCTGTTACTACAACAACTACAGCCTCTCTCAGCCAAGGTATTTCTGCAAGTCTTGCAGGAGATACTGGACCAAAGGAGGAACACTGAGGAATGTTCCAGTGGGTGGGGGATGCAGGAAGAACAAGAGGTCTTCATCATCATCATCATCTTCATCATCATCAAAGAGGGCTCAGGAGCAGGCATTCACACCCAATTCCAACCCATTCACTGGCCTCCCTCATTTGTCCTATGACTCGAGTGATCTTACCTTAGCATTAGCCAGGCTCCAAAAACAATCTTGTGGGCTTGGTTTTGATGACCATGATCTCTCAATTCTGGGGAACCCCACAAGCTCCCTTTGTGATATTCTTGGCAGCCAAGGCCTTAACCACACTTCAACAAACACTGGATTCTTGGAGGCACTTCGAAGTGGGTTCCAAGGAACACAGAACAACAATAGTACTCTTCATCATCATCAGAATCTGTACTATTCATATGGGAATGGGGACATGGGGGAGGTGGTGGATAATGGGAATAATTCTTGTGGGGTTGGGATTAGTGGAGAGATGATGCTACCTAATTATGATAATGAGATAAGCAATGCGGCCACTCAAGCAGTGAGTGTCACTACCATGAAGCAAGAGATGTGTAGTGGCAGGGAACACATGATGAGTGAAAGTAGTAGGGTGTTTGGGGGAACCCCATGGCACCACATCAATAATGGGGACACAAACATGGGGGAGCTTGATTCAGCAAGAGCAAGTTGGAATAATGGTTTCACATCTAATTGGCAAGGCCTTCTCCATAGTCCCTTAATGTAA 1053 0.4454 MKHIAQINSSAEEKLLFVQPQQLINFMFTDSILCMIIILLLQQMSSQSLENMIACSKGQQDKKPRPQPPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSSSSSSSSKRAQEQAFTPNSNPFTGLPHLSYDSSDLTLALARLQKQSCGLGFDDHDLSILGNPTSSLCDILGSQGLNHTSTNTGFLEALRSGFQGTQNNNSTLHHHQNLYYSYGNGDMGEVVDNGNNSCGVGISGEMMLPNYDNEISNAATQAVSVTTMKQEMCSGREHMMSESSRVFGGTPWHHINNGDTNMGELDSARASWNNGFTSNWQGLLHSPLM* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1649 350 Pfam Dof domain, zinc finger 71 127 IPR003851 GO:0003677|GO:0006355
Dod10g1649 350 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 42 349 IPR045174 GO:0003700|GO:0006355
Dod10g1649 350 ProSitePatterns Zinc finger Dof-type signature. 75 111 IPR003851 GO:0003677|GO:0006355
Dod10g1649 350 MobiDBLite consensus disorder prediction 124 154 - -
Dod10g1649 350 ProSiteProfiles Zinc finger Dof-type profile. 73 127 IPR003851 GO:0003677|GO:0006355
Dod10g1649 350 MobiDBLite consensus disorder prediction 118 154 - -
Dod10g1649 350 PANTHER DOF ZINC FINGER PROTEIN DOF3.2-LIKE 42 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1649 Dod-Chr10 37462155 37464021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1649 71 350 C2C2-Dof Transcription Factor Family AT2G28510 42.517 2.48e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod10g1649 zf-Dof 7.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1649 - - gmx:100799737 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1649 10 37462155 37464021 Dod10g1649 10 37462155 37464021 ECH
Dod10g1649 10 37462155 37464021 Dod03g2843 03 60308497 60310576 PCT