Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0768 ATGCTTATACTAGTGGGGACCGTGCAAGGAACAATGAGTTCAATGGCTACCCCATTGAGTTTGGGGAGCCTAATGGGTGTGAGTTCCTCTGGAAGGTCCCATTCTGTTGTGAGGAGGGTCTCTCTTTCTAGGGGGAACTCTAAGGACAAGAGGAGATGGCATTGTGTCTCACTGTCTGTGTGTAGATACTCAGTGACCACCACTGATTTTGTTGCTGACCAAGGAAATTCAGTATCCCTTGAGTCTAACAGTAGTAGCAGTAGTAGTAGAGGAAGTAATGGTGGAGATGATGGCAGTGGTGGTTTTATCCTTAAGCCTCCTCCTAAGCTTTTGTTGAAGTCCCCAGATAATAAGGGTAATCCTGTTTCGGGCGCAAGTTCGGAGTCTTGGGGCCCTTCGAGGAATGCTGAGTCCCCTGATGATGTGGAAGAGAGGAATAAAGTGATTGAATCGCTCGGAGAGGTTTTGGAGAAGGCCGAAAAGCTGGAAAGTTCTAAGTTGGATGAGAAAAGAAATAATGGGTCGGTAAATAAACCAGCGGTGTCCAATGTAAATGCTAGTCCTAAGACTGATAAACCGGTGAATTCAGGGAAAAACCAGAAGGCTAAAACCTTGAAGAGTGTATGGCGTAAAGGGGACACAGTTGCAAGTGTGCAGAAGGTTGTCAAGGAAGTACCTAAGCCTAATAACAAGAATGTAGGGGAGAAATCTCAAAACGGGGGAGGGGAGAAGGTAACATCCGAACCTCGCGCTCCTCAGCCACCGTCAAAACCTCAGCCAACTTTACAAGCTAAACCTTCTATAGCTTCCCCACCCATCAAAAAACCAGTTGTCTTGAAAGATAGGGGGGCAGCTGACACGTCTGTTAAATCTAAAGAAAGGAAGGGCCCCATTTTGATTGACAAGTTTGCTGCGAAAAAACCAGTTGTTGATCCTCTGATTGCTCAAGCAGTCCTAGCACCTCCAAAACCTGGGAAGGCTCCTCTGCCGGGAAAGTTTAAAGATGATTACCGGAAGAAAGGTGGCCCGGCTGGAGGAGGACCAAGAAGACGTATTATGGAGGATGACGATGATGTGATTCCTGATGACGACACATCGGAACTCAACGTCTCTATTCCTGGTGCTGCGAGAAAAGGAAGAAAATGGAGTAAAGCAAGCCGAAAGGCAGCAAGGCTACAGGCTGCCAAGGATGCAGCTCCTGTCAAAGTAGAAATTCTAGAGGTCAGTGACAAAGGTATGCTGGTGGAGGAGTTAGCCTACAACTTGGTGGTCAGTGAAGGTGAAATCCTCGGTTCTCTATATGCCAAGGGGATTAAACCAGATGGGGTGCAAACTCTTGACAAAGATATGGTGAAGATGATTTGTAAAGAGTATGATGTGGAAGTTATAGATGCAGATCCTGTCAAAGTCGAATCATTAGCGAAGAAAAGGGAAATTCTTGATGAAAACGACCTTGACAAACTCAAAGACAGGCCTCCTGTCATTACCATTATGGGCCATGTAGATCATGGCAAGACTACTCTTTTGGATTATATACGGAAGAGCAAGGTAGCTGCTTCTGAAGCCGGTGGGATTACCCAGGGAATCGGGGCTTATAAAGTACAAGTGCCTGTTGATGGCAAACAGTTGCCCTGTGTTTTCCTTGACACTCCTGGGCATGAGGCATTTGGGGCAATGAGAGCTCGTGGAGCAAGCGTAACAGACATTGCTATTATTGTCGTGGCTGCTGATGATGGCATTCGTCCTCAAACAAATGAAGCTATAGCTCATGCCAAAGCAGCAGGAGTACCCATAATCATTGCTATAAACAAGATAGATAAAGATGGAGCAAATCCTGAACGAGTTATGCAAGAGCTTTCTTCTATTGGCTTAATGCCAGAAGACTGGGGTGGTGACATCCCAATGGTTCAGATAAGTGCTCTTAAAGGGGAGAACATAGATGATCTTTTGGAAACTGTTATGCTTGTGGCTGAGTTGCAAGAGCTGAAAGCAAATCCTGATAGAAATGCAAAGGGAACAGTCATTGAGGCAGGCCTAGATAAATCAAAAGGACCATTTGCTACCTTTATTGTACAAAATGGCACCCTTAGAAGGGGAGATGTAGTAGTTTCCGGAGAAGCTTTTGGAAAGGTGCGGGCTTTATTTGATGATGCTGGAAACCGTGTTGATTTAGCTACACCTTCTATACCCGTACAGGTTATTGGATTGAATAATGTTCCAATTGCTGGTGATGAATTTGAGGTTGTTGACTCCCTTGATACTGCACGTGAAAAGGCAGAATCCCGTGCTGAGTCATTGCGAAATGAGCGTATTTCCTCAAAGGCAGGGGATGGCAAGGTTACTCTTTCGTCCTTAGCTTCTGCAGTTTCAGCAGGAAAGCTTTCTGGACTAGACTTGCACCAACTAAATGTTATCTTGAAGGTTGATCTTCAGGGATCCATTGAAGCTGTCAGACAAGCACTGCAGGTGCTTCCACAAGCTAATGTCACATTGAAGTTTTTGTTGGAAGCAACAGGTGATATAAACACAAGTGATGTTGATCTCGCAGTTGCAAGCAAAGCCATTATTTTTGGATTTAATACCAAAGCACCAGGCTCCGTGAAAAGCTATGCAGAGAATAAAGCCGTTGAGATTAGATTATATAGAGTCATTTATGACTTAATTGATGATGTGAGAAATGCAATGGAAGGGCTCCTGGAGCCTGTTGAGGAACGAGTAAAAATTGGCTCAGCAGAAGTACGGGCCACATTCAGCAGTGGTAGTGGTCGCGTTGCTGGATGCATGGTTACAGAGGGAAAGGTAGTAAAAGGTTGTGGTATTCGAGTTATTCGGAGGGGAAAAGAAGTCCATGTTGGTATTCTTGATTCTTTGAGACGGGTCAGGGAGATTGTTAAAGAGGTAAATGCTGGTCTTGAGTGTGGACTTGGCTTAGAAGACTTTGATGGTTGGGAAGACGGTGACATTCTAGAAGCCTTCAACACGGTTCAGAAGAAGCGGACCCTTGAAGAGGCCTCGGCATCCATGGCAGCTGCTGTTGAGGGAGTAGGAGTTGAATTATAG 3060 0.4529 MLILVGTVQGTMSSMATPLSLGSLMGVSSSGRSHSVVRRVSLSRGNSKDKRRWHCVSLSVCRYSVTTTDFVADQGNSVSLESNSSSSSSRGSNGGDDGSGGFILKPPPKLLLKSPDNKGNPVSGASSESWGPSRNAESPDDVEERNKVIESLGEVLEKAEKLESSKLDEKRNNGSVNKPAVSNVNASPKTDKPVNSGKNQKAKTLKSVWRKGDTVASVQKVVKEVPKPNNKNVGEKSQNGGGEKVTSEPRAPQPPSKPQPTLQAKPSIASPPIKKPVVLKDRGAADTSVKSKERKGPILIDKFAAKKPVVDPLIAQAVLAPPKPGKAPLPGKFKDDYRKKGGPAGGGPRRRIMEDDDDVIPDDDTSELNVSIPGAARKGRKWSKASRKAARLQAAKDAAPVKVEILEVSDKGMLVEELAYNLVVSEGEILGSLYAKGIKPDGVQTLDKDMVKMICKEYDVEVIDADPVKVESLAKKREILDENDLDKLKDRPPVITIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVQVPVDGKQLPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKDGANPERVMQELSSIGLMPEDWGGDIPMVQISALKGENIDDLLETVMLVAELQELKANPDRNAKGTVIEAGLDKSKGPFATFIVQNGTLRRGDVVVSGEAFGKVRALFDDAGNRVDLATPSIPVQVIGLNNVPIAGDEFEVVDSLDTAREKAESRAESLRNERISSKAGDGKVTLSSLASAVSAGKLSGLDLHQLNVILKVDLQGSIEAVRQALQVLPQANVTLKFLLEATGDINTSDVDLAVASKAIIFGFNTKAPGSVKSYAENKAVEIRLYRVIYDLIDDVRNAMEGLLEPVEERVKIGSAEVRATFSSGSGRVAGCMVTEGKVVKGCGIRVIRRGKEVHVGILDSLRRVREIVKEVNAGLECGLGLEDFDGWEDGDILEAFNTVQKKRTLEEASASMAAAVEGVGVEL* 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0768 1019 Hamap Translation initiation factor IF-2 [infB]. 9 999 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Dod10g0768 1019 Pfam Elongation factor Tu GTP binding domain 495 655 IPR000795 GO:0003924|GO:0005525
Dod10g0768 1019 Gene3D Translation factors 666 782 - -
Dod10g0768 1019 SUPERFAMILY Translation proteins 905 999 IPR009000 -
Dod10g0768 1019 MobiDBLite consensus disorder prediction 320 367 - -
Dod10g0768 1019 SUPERFAMILY Translation proteins 666 749 IPR009000 -
Dod10g0768 1019 MobiDBLite consensus disorder prediction 329 356 - -
Dod10g0768 1019 CDD mtIF2_IVc 909 991 - -
Dod10g0768 1019 TIGRFAM small_GTP: small GTP-binding protein domain 492 653 IPR005225 GO:0005525
Dod10g0768 1019 PRINTS GTP-binding elongation factor signature 562 573 IPR000795 GO:0003924|GO:0005525
Dod10g0768 1019 PRINTS GTP-binding elongation factor signature 494 507 IPR000795 GO:0003924|GO:0005525
Dod10g0768 1019 PRINTS GTP-binding elongation factor signature 546 556 IPR000795 GO:0003924|GO:0005525
Dod10g0768 1019 PRINTS GTP-binding elongation factor signature 598 607 IPR000795 GO:0003924|GO:0005525
Dod10g0768 1019 MobiDBLite consensus disorder prediction 119 134 - -
Dod10g0768 1019 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 483 666 IPR027417 -
Dod10g0768 1019 Coils Coil 749 769 - -
Dod10g0768 1019 MobiDBLite consensus disorder prediction 279 296 - -
Dod10g0768 1019 CDD IF2_eIF5B 493 659 - -
Dod10g0768 1019 Gene3D - 487 665 IPR027417 -
Dod10g0768 1019 MobiDBLite consensus disorder prediction 175 203 - -
Dod10g0768 1019 Gene3D - 798 903 IPR036925 -
Dod10g0768 1019 TIGRFAM IF-2: translation initiation factor IF-2 411 1001 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Dod10g0768 1019 MobiDBLite consensus disorder prediction 76 144 - -
Dod10g0768 1019 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 797 909 IPR036925 -
Dod10g0768 1019 CDD IF2_mtIF2_II 670 764 IPR044145 -
Dod10g0768 1019 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 43 1009 IPR015760 -
Dod10g0768 1019 PANTHER TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC 43 1009 - -
Dod10g0768 1019 MobiDBLite consensus disorder prediction 76 95 - -
Dod10g0768 1019 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 490 663 IPR000795 GO:0003924|GO:0005525
Dod10g0768 1019 Pfam Translation-initiation factor 2 798 891 IPR023115 -
Dod10g0768 1019 MobiDBLite consensus disorder prediction 163 296 - -
Dod10g0768 1019 Gene3D Translation factors 904 1000 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0768 Dod-Chr10 22808101 22816492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0768 491 889 Eukaryotic Initiation Factors Gene Family AT1G76810 28.450 1.07e-27 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0768 10 22808101 22816492 Dod10g0768 10 22808101 22816492 ECH