Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0756 ATGAGCAACATAAGCTTGGTAGAGGCAAAGCTGCCACCAGGGTTCAGGTTTCATCCCAGAGATGAGGAGCTTGTGTGTGATTACTTGATGAAGAAGGTGATACATAATGAATCCCTTGATCTCATGATTGATGTTGACCTTAACAAGTGTGAGCCATGGGATATTCCTGAAACGGCATGTGTGGGAGGGAAGGAGTGGTACTTCTACACACAAAGAGACCGCAAGTATGCAACAGGGCTGCGCACAAACCGTGCCACTGCCTCAGGCTATTGGAAGGCCACAGGGAAGGACAGGCCTATCCTCCGGAAGGGCACCCTTGTTGGTATGAGGAAGACTTTAGTGTTCTACCAAGGAAGGGCACCCAAAGGGAGAAAGACTGAGTGGGTCATGCATGAGTTTCGCATTGAAGGCCCCCTTGGCCCTCCTAAAACTTCTTCAAAGGAAGATTGGGTTTTGTGTAGGGTATTCTACAAAAACAGGGAAGTTGCTGCCAAACCAAGCATGGGAAGCTGCTATGATGACACAGGCTCTTCATCTCTTCCAGCATTGATGGACTCATACATCAGTTTTGACCAAGCTCAAACCCATGCAGCAGATCATCATGAGTATGAGCAAGTGCCCTGCTTCTCCATTTTCTCTCATCAAAACCAAGCAAGCCCCATTTTCAACCACATAACCACCATGGAGCCAACCAACAATAATAATGCAACTATATATGGTGGAGGAACTCCCAATTTGGGTTCTTGCTTAGACCCCTTTTCTTGTGATAGAAAAGTGTTGAAAGCTGTGTTGAGTCAGCTCACAAAGATGGAAAGAAACCCACCTAATAACACTCCTAGTCTAAAAGGGTCACCAAGCTTAGGGGAAGGAAGTTCAGAGAGTTATTTATCTGAGGTGGGCATGCCCAACATGTGGAACAATTACTAA 927 0.4628 MSNISLVEAKLPPGFRFHPRDEELVCDYLMKKVIHNESLDLMIDVDLNKCEPWDIPETACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRIEGPLGPPKTSSKEDWVLCRVFYKNREVAAKPSMGSCYDDTGSSSLPALMDSYISFDQAQTHAADHHEYEQVPCFSIFSHQNQASPIFNHITTMEPTNNNNATIYGGGTPNLGSCLDPFSCDRKVLKAVLSQLTKMERNPPNNTPSLKGSPSLGEGSSESYLSEVGMPNMWNNY* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0756 308 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 304 - -
Dod10g0756 308 SUPERFAMILY NAC domain 2 159 IPR036093 GO:0003677|GO:0006355
Dod10g0756 308 Pfam No apical meristem (NAM) protein 12 135 IPR003441 GO:0003677|GO:0006355
Dod10g0756 308 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Dod10g0756 308 MobiDBLite consensus disorder prediction 269 296 - -
Dod10g0756 308 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Dod10g0756 308 PANTHER NAC (NO APICAL MERISTEM) DOMAIN TRANSCRIPTIONAL REGULATOR SUPERFAMILY PROTEIN 3 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0756 Dod-Chr10 22659243 22664409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0756 2 306 NAC Transcription Factor Family AT1G56010 60.625 3.96e-128 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod10g0756 NAM 1.1e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0756 10 22659243 22664409 Dod10g0756 10 22659243 22664409 ECH