Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0720 ATGATGGAAAGGCTCTGGGGTGAAAACTTCTTTGATCCGGCCACAAAGAAGTGGACCACCAAGAACACTGGTTCTCCTACCTGCAAACGTGGGTTTGTCCAGTTTTGTTATGAGCCTATCAAGCAGATAATTAATACTTGTATGAATGATCAGAAGGATAAGCTGTGGCCGATGTTGCAGAAGCTCGGAGTCAACATGAAGTCTGAGGAGAAGGACTTGATGGGTAAAGCATTGATGAAGCGTGTCATGCAAACCTGGCTCCCAGCAAGTAGTGCACTATTGGAAATGATGATATTCCATCTTCCCTCTCCCTCTAAGGCCCAAAAATATCGTGTTGAGAATTTGTATGAGGGTCCTCTTGATGATCAATATGCTACTGCTATCAGAAATTGTGATCATGAAGGCCCTCTGATGCTGTATGTCTCAAAGATGATTCCTGCATCTGATAAGGGTAGGTTTTTCGCTTTTGGTCGTGTTTTCTCTGGTAGGGTGTCTACAGGTTTGAAGGTCAGAATTATGGGACCAAATTATGTTCCTGGGGAGAAGAAAGACCTGTATGTAAAGAGTGTGCAAAGAACTGTCATTTGGATGGGTAAAAGACAGGAAACAGTGGAGGATGTGCCTTGTGGTAACACAGTTGCCATGGTTGGTTTGGATCAATTTATCACCAAGAATGCTACCTTGACAAATGAGAAGGAAGTTGATGCCCACCCTATCCGAGCTATGAAGTTCTCTGTCTCACCTGTGGTTCGTGTTGCTGTTCAGTGCAAGGTTGCATCAGATCTTCCTAAGCTTGTTGAAGGTCTGAAGAGGTTGGCCAAGTCAGATCCTATGGTCGTTTGTACCATTGAGGAGTCTGGAGAGCACATTGTTGCTGGTGCTGGAGAGCTTCATCTGGAAATTTGCTTGAAGGACTTGCAGGAAGATTTCATGGGTGGAGCTGAGATTATTAAATCTGACCCTGTTGTGTCATTCCGTGAGACTGTCTTGGAGAGGTCATGCCGCACTGTGATGAGCAAGTCACCCAACAAGCACAACCGTCTTTACATGGAAGCAAGACCATTGGAGGAGGGGCTTGCAGAGGCCATTGATGATGGCAAGATTGGACCAAGGGATGACCCTAAGGTCCGCTCTAAAATCTTGTCAGAAGAGTTTGGTTGGGATAAGGATCTTGCGAAGAAGATCTGGTGTTTTGGACCTGAGACTCTCGGACCCAACATGGTGGTCGATATGTGTAAGGGAGTCCAGTACTTGAATGAAATCAAGGACTCTGTAGTTGCTGGATTCCAGTGGGCTTCAAAAGAAGGTGCATTGGCTGAAGAAAACATGCGTGCCATCTGCTTCGAAGTATGTGATGTCGTCCTGCATGCTGATGCTATCCACAGAGGTGGTGGCCAGATCATCCCTACTGCCAGGAGAGTCTTCTATGCTTCCCAGTTGACTGCCAAGCCCAGGCTTCTTGAACCCGTCTACCTGGTGGAAATCCAGGCTCCTGAGCAAGCTCTTGGTGGTATCTACAGTGTTCTTAACCAGAAGCGTGGACATGTCTTTGAGGAGATGCAGAGGCCTGGTACTCCACTTTACAACATCAAAGCATACCTCCCTGTCATCGAGTCCTTCGGATTCTCCAGCACATTGAGGGCTGCAACGTCTGGTCAGGCTTTCCCACAGTGTGTGTTTGATCATTGGGATATGATGTCCTCGGATCCATTGGAGGCCGGATCACAAGCTGCACAGCTTGTTACAGACATCCGCAAGAGGAAGGGCTTGAAGGAGCAGATGACCCCACTCTCCGAGTTCGAAGACAAGCTTTAA 1815 0.4722 MMERLWGENFFDPATKKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVNMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSKAQKYRVENLYEGPLDDQYATAIRNCDHEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGKIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETLGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRAICFEVCDVVLHADAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEAGSQAAQLVTDIRKRKGLKEQMTPLSEFEDKL* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0720 604 SMART EFG_IV_2 366 483 IPR005517 GO:0005525
Dod10g0720 604 CDD EF2_II 136 231 - -
Dod10g0720 604 CDD aeEF2_snRNP_like_IV 320 492 - -
Dod10g0720 604 SMART EFG_C_a 485 574 IPR000640 -
Dod10g0720 604 Pfam Elongation factor G C-terminus 485 572 IPR000640 -
Dod10g0720 604 SUPERFAMILY EF-G C-terminal domain-like 488 599 IPR035647 -
Dod10g0720 604 Gene3D Elongation Factor G (Translational Gtpase), domain 3 247 324 - -
Dod10g0720 604 Gene3D - 484 604 - -
Dod10g0720 604 Pfam Elongation factor Tu domain 2 155 228 IPR004161 GO:0005525
Dod10g0720 604 CDD EF2_snRNP_III 248 320 - -
Dod10g0720 604 Pfam Elongation factor G, domain IV 371 483 IPR005517 GO:0005525
Dod10g0720 604 Pfam Elongation Factor G, domain III 248 310 IPR041095 -
Dod10g0720 604 PANTHER - 1 603 - -
Dod10g0720 604 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 603 - -
Dod10g0720 604 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 102 IPR027417 -
Dod10g0720 604 CDD eEF2_snRNP_like_C 488 566 - -
Dod10g0720 604 SUPERFAMILY EF-G C-terminal domain-like 245 321 IPR035647 -
Dod10g0720 604 SUPERFAMILY Translation proteins 104 237 IPR009000 -
Dod10g0720 604 Gene3D - 331 483 IPR014721 -
Dod10g0720 604 SUPERFAMILY Ribosomal protein S5 domain 2-like 323 487 IPR020568 -
Dod10g0720 604 Gene3D Yeast translation eEF2 (G' domain) 1 87 - -
Dod10g0720 604 Gene3D Translation factors 104 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0720 Dod-Chr10 21819042 21820856 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0720 1 604 Eukaryotic Initiation Factors Gene Family AT1G56070 91.722 0.0 1180
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0720 10 21819042 21820856 Dod10g0720 10 21819042 21820856 ECH