Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0709 ATGCCCCTCTCCCCTTCTTCCATGGCCTCCATCCCTCAGTTCTATTCAAACTACACATTCACTACCTCTGATCTTGTAGATTTCCCCACCCCTGCTGCACTCATCAATGGCAACAACAACAACAACAACAGCAACAGCAACAACTACACCTCATCAGTAATGGACAATTTTGCCATGTGGGGTAATAATGGCCAAGATGGCTTCAGTATTAATTACCACCCTGTGCTTGATAATGGGGCACTTGATCATGTTGTGTCACTTGATTGTGACACCATGTCCTCTGCTAGTTGGATGCCAAGTTTTGGTGAGCAACTTGGGGGTGTCTCAGATTTTGCTGTGCCAGCTATTTCAGACTGCAAAATGGGCTTGTATGGGGGAAGCACCATCACAGGGTTTCAGAGCTTCAGCGGCAGCAGGTTCCACCAGCCACGTGTTGGTGAGTTTGGGGAAGAATGTTGTGGTTTTGTGGAGGATATTAAGCCACCTGCTTATCCTAATGCTGCAAGAGAAAATTGGGGAATTCAAGGTAATCAAATGCCAGCAGTCGAAGAGCCTAACATAAAGGTAGGAAGGTACTCTGAAGAAGAAAGAAAGGAAAGAATTCTCCGATATTTGAAGAAAAGGAATCAAAGAAACTTTAACAAAACCATCAAGTATGCATGTCGGAAAACATTGGCTGATCGGCGAGTTAGAGTTAGGGGAAGGTTTGCTAGAAACAATGAGCTATGTGAGGAAGACATGGCAACAAAAAAGCATGAGGATCATCATCTCAAAGAAGACTTTTATGGTGGTGATTCAATCCAGTTCCAGTTAAAGAATGATGAGGAGGACTGGTTGCAAGAGGCCATGGCAAGTTTGGTCTATTTGTCTCACTCTTCACCAGAAGATATGTAG 894 0.4418 MPLSPSSMASIPQFYSNYTFTTSDLVDFPTPAALINGNNNNNNSNSNNYTSSVMDNFAMWGNNGQDGFSINYHPVLDNGALDHVVSLDCDTMSSASWMPSFGEQLGGVSDFAVPAISDCKMGLYGGSTITGFQSFSGSRFHQPRVGEFGEECCGFVEDIKPPAYPNAARENWGIQGNQMPAVEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEEDMATKKHEDHHLKEDFYGGDSIQFQLKNDEEDWLQEAMASLVYLSHSSPEDM* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0709 297 Pfam CCT motif 197 239 IPR010402 GO:0005515
Dod10g0709 297 ProSiteProfiles CCT domain profile. 197 239 IPR010402 GO:0005515
Dod10g0709 297 PANTHER ACTIVATOR OF SPOMIN::LUC2 8 292 - -
Dod10g0709 297 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0709 Dod-Chr10 21643290 21645709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0709 193 247 C2C2-CO-like Transcription Factor Family AT5G57660 47.273 3.18e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod10g0709 CCT 9.6e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0709 10 21643290 21645709 Dod10g0709 10 21643290 21645709 ECH