Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0644 ATGGCCTCATCAGCATCACCCGCAGCACTCTCTCTCCTCCCCTCCACCACCACCACCAACTCCTCCTCGTCCTCCTCCCGCACCCGCCCCTCCGTCCTCCAATTCTCGTCAAGCGGCGGCCTCCGCCTCCGCTCCGCCGGGATCCGCCGCCTGGGGTTCGCCGCCGCCGACCCTCTCCTTGCTCTCCACGTGGCATCGAGGGTCAACTCCGTCTCCTCTTTGGGGAAGGGAGTGAGGGGTGTTGTCTCGATGGCGAAGAAGAGTGTAGGGGACTTGACCGCGGCTGACTTGAAGGGGAAGAGGGTGTTCGTGAGGGCCGACCTCAACGTCCCACTCGATGACAACCAGAAGATTACTGATGACACCAGGATCCGAGCTGCCATACCCACCATCAAGCACCTCATCCAGAATGGTGCCAAAGTCATCCTCTCCAGCCACTTGGGACGACCAAAGGGTGTCACTCCCAAGTACAGCTTGGCACCTCTTGTGTCCCGGCTTTCTGAACTCATTGGTATCCAGGTTGTCAAGGCTGAGGACAGTATTGGTCCAGAAGTAGAAAAGCTGGTGGCTGCCCTTCCAGAAGGAGGTGTTCTTCTTCTAGAAAATTTGAGGTTTTACAAGGAGGAAGAAAAGAATGATCCTGAGCATGCAAAGAAGCTTGCCTCTGTAGCAGATCTATACGTGAATGATGCATTCGGTACTGCTCATAGGGCACATGCATCAACAGAGGGTGTCACTAAATACCTTAAGCCATCTGTTGCTGGTTTTCTTTTGCAAAAGGAACTTGACTACCTTGTTGGGGCTGTGTCAAACCCCAAAAGGCCATTTGCTGCCATTGTGGGTGGTTCCAAGGTCTCATCCAAAATTGGAGTTATTGAGTCTCTTCTAGAAAAAGTTGACATCCTCCTTCTTGGTGGAGGTATGATCTTCACATTTTACAAGGCACAAGGTCTCTCAGTGGGTTCATCTCTTGTAGAGGAAGATAAGTTGGATCTTGCTACATCTCTACTTGCAAAGGCCAAGGCAAAGGGGGTGTCTCTCTTGTTACCAAGTGATGTGGTAATTGCAGACAAATTTGCTCCTGATGCAAACAGCAAGGTTGTGCCAGCATCTGCCATCCCTGATGGCTGGATGGGATTGGACATTGGTCCAGATTCCATTAAAACGTTCAGTGAAGCACTGGATACTACCAAAACCATCATATGGAATGGACCAATGGGAGTTTTCGAGTTTGACAAGTTTGCTGTTGGGACAGAGGCTATTGCAAAAAAGCTGGCTGAACTCAGTGGAAAGGGAGTGACCACAATAATTGGAGGAGGAGATTCTGTTGCCGCTGTGGAGAAAGTAGGAGTTGCGAACGTCATGAGCCACATATCCACTGGTGGTGGTGCCAGCTTGGAGTTACTGGAAGGAAAAGAGCTTCCTGGTGTCCTTGCTCTTGATGAAGCCATACCAGTCGCTGTGTAA 1467 0.5119 MASSASPAALSLLPSTTTTNSSSSSSRTRPSVLQFSSSGGLRLRSAGIRRLGFAAADPLLALHVASRVNSVSSLGKGVRGVVSMAKKSVGDLTAADLKGKRVFVRADLNVPLDDNQKITDDTRIRAAIPTIKHLIQNGAKVILSSHLGRPKGVTPKYSLAPLVSRLSELIGIQVVKAEDSIGPEVEKLVAALPEGGVLLLENLRFYKEEEKNDPEHAKKLASVADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLDLATSLLAKAKAKGVSLLLPSDVVIADKFAPDANSKVVPASAIPDGWMGLDIGPDSIKTFSEALDTTKTIIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGVANVMSHISTGGGASLELLEGKELPGVLALDEAIPVAV* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0644 488 Hamap Phosphoglycerate kinase [pgk]. 91 482 IPR001576 GO:0004618|GO:0006096
Dod10g0644 488 Pfam Phosphoglycerate kinase 94 472 IPR001576 GO:0004618|GO:0006096
Dod10g0644 488 ProSitePatterns Phosphoglycerate kinase signature. 101 111 IPR015911 GO:0004618|GO:0006096
Dod10g0644 488 Gene3D - 271 458 IPR015824 GO:0004618|GO:0006096
Dod10g0644 488 SUPERFAMILY Phosphoglycerate kinase 91 482 IPR036043 GO:0004618|GO:0006096
Dod10g0644 488 MobiDBLite consensus disorder prediction 1 33 - -
Dod10g0644 488 PRINTS Phosphoglycerate kinase family signature 96 112 IPR001576 GO:0004618|GO:0006096
Dod10g0644 488 PRINTS Phosphoglycerate kinase family signature 118 140 IPR001576 GO:0004618|GO:0006096
Dod10g0644 488 PRINTS Phosphoglycerate kinase family signature 195 210 IPR001576 GO:0004618|GO:0006096
Dod10g0644 488 PRINTS Phosphoglycerate kinase family signature 277 296 IPR001576 GO:0004618|GO:0006096
Dod10g0644 488 PRINTS Phosphoglycerate kinase family signature 254 276 IPR001576 GO:0004618|GO:0006096
Dod10g0644 488 PRINTS Phosphoglycerate kinase family signature 223 245 IPR001576 GO:0004618|GO:0006096
Dod10g0644 488 PRINTS Phosphoglycerate kinase family signature 458 475 IPR001576 GO:0004618|GO:0006096
Dod10g0644 488 PRINTS Phosphoglycerate kinase family signature 435 446 IPR001576 GO:0004618|GO:0006096
Dod10g0644 488 PRINTS Phosphoglycerate kinase family signature 399 424 IPR001576 GO:0004618|GO:0006096
Dod10g0644 488 Gene3D - 48 155 IPR015824 GO:0004618|GO:0006096
Dod10g0644 488 PANTHER PHOSPHOGLYCERATE KINASE 1 483 IPR001576 GO:0004618|GO:0006096
Dod10g0644 488 CDD Phosphoglycerate_kinase 92 482 IPR001576 GO:0004618|GO:0006096
Dod10g0644 488 Gene3D - 157 483 IPR015824 GO:0004618|GO:0006096
Dod10g0644 488 PANTHER PHOSPHOGLYCERATE KINASE 1 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0644 Dod-Chr10 20189461 20193828 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0644 10 20189461 20193828 Dod10g0644 10 20189461 20193828 ECH