Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0609 ATGGCCCCAATGACTCTCCCTCCAGGATTCAGATTCCACCCTACGGACGAAGAACTTGTTGCTTACTACTTAGAAAGAAAAATAACAGGTCGCTCAATAGAGCTTGACATCATAGCAGAAGTTGATCTATATAAATCTGAACCATGGGATTTACCAGATAAATCAGTCCTCCCTAGCAAAGACATGGAGTGGTATTTTTACAGTCCAAGGGATAGAAAGTACCCAAATGGATCAAGAACTAACAGGGCAACAAGAGCTGGTTACTGGAAAGCCACTGGGAAAGATAGGCCAGTGCACTCTCAAAAGAGGCCAGTTGGTATGAAGAAGACACTGGTGTATTACAGAGGCAGAGCACCCCATGGGATTAGAACCAACTGGGTTATGCATGAGTACCGCCTTATTGAATCAGTGCCCGGTACTTCTCACTCATCTTTGAAGGATTCCTACTCATTGTGTCGCATTTTCAAGAAGACAATTCAAGTTCCAGCCAAGCCTAAAGAAGAAGAACAAGTACAGGATGGGAAGAACGACTTGATGTGGGTCTCAGAAGAACAAGCATTAGGGGAAGACTCAAGTGGCATTGAGATTTCAAGAGAAATGGAAAATGTGGATGAGAAAGTGCTTCTCAATCATGATCAACACCCTAAATTTCCTTGTGATGCTTCTTCTTCTGATCTCACTCAAGGCACATGTACACCTACCGATACCGGTATAGCAGATGATTTTCATGCACAATTTGCTTGTGATGAAGCAAACAGTGCAATCAATTCGTACTCAATGGGAATAGGCTACCCCTCAAACCTATTTCAGGATATGCAATTACCTATCTATGCAAGCATGCAAAATTATCAACTCCCCCACACACCTTTAATGCTGGAAGATTTTCCACAAATAAATTTAGCCGAGACAAAGTCAATGAAGCCTGAAATGACCGAAGACTGCATGTTATATAACAGATACCGGGATAGTATGAATGGAACACTAGAAGAGATCATCTCCTTGTGTTCTTCTCAAGACAACTCTGTCGCTTTGCCCATGCTAGAGTGA 1047 0.4241 MAPMTLPPGFRFHPTDEELVAYYLERKITGRSIELDIIAEVDLYKSEPWDLPDKSVLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRPVHSQKRPVGMKKTLVYYRGRAPHGIRTNWVMHEYRLIESVPGTSHSSLKDSYSLCRIFKKTIQVPAKPKEEEQVQDGKNDLMWVSEEQALGEDSSGIEISREMENVDEKVLLNHDQHPKFPCDASSSDLTQGTCTPTDTGIADDFHAQFACDEANSAINSYSMGIGYPSNLFQDMQLPIYASMQNYQLPHTPLMLEDFPQINLAETKSMKPEMTEDCMLYNRYRDSMNGTLEEIISLCSSQDNSVALPMLE* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0609 348 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Dod10g0609 348 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Dod10g0609 348 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Dod10g0609 348 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Dod10g0609 348 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 307 - -
Dod10g0609 348 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0609 Dod-Chr10 19338802 19342834 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod10g0609 NAM 3.3e-39 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0609 10 19338802 19342834 Dod10g0609 10 19338802 19342834 ECH