Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0580 ATGCAGATGAGTAACAGTTTAGGAGAGGTTCTTAAGACAGATCATAGTGATCAAAGTAGTGAAAATTCAGGAAACAATTCGCCAACTCATCCCATAAAGGCGAATCAAGCAGCAAAAGATGCCACCACAACTGACAATTCAACAAGTGGAGACCAGGTTTCCAAAACCAATGCAAAGTTAACAAGTAAATCTAGACCTCAGATGTTAACACCAACAAGCAGAAACATTTCTGAATTCAATACTCAGCGCCAAAGTCCAAACACAAGGATGAACTCAAATTTGGATCCTGCAGCTAGCTCACCAGGGCTACCAACAGGAGCAACAAAGGGAATGCCCCCAAATACAAAGACCAGCAGCAACCAAGGCCCAGCGAGCGGCACTAGCTCTCGCAGCGACAGTTTAGAGAGCACAAGTGCACCCCTTAGACCACACACTGGCGGTGATGTGAGGTGGGAAGCAATTAACATGGCTTCAAAAGGAGGCCCTCTAAATCTCAGCAATTTCAGGCTTCTAAAGCGCATTGGTTATGGAGACATTGGAAGTGTGTATCTTGTGGAACTTAAGGGAGCTAAGGCACACTTTGCCATGAAAGTAATGGACAAGGCTGCACTAATTAGCAGGAATAAGCTTCTGAGAGCACAAACTGAAAGAGAGATTCTTGGACATCTTGATCACCCCTTCTTGCCAACATTGTATTCTTACTTTGAAACAGATAAGTTTTACTGTTTGGTCATGGAGTTCTGTAGTGGAGGCGATCTTCACTCTCTTCGACAGAAGCAACCTAACAAGTGTTTCACTGAAGAGGCTGCAAGGTTTTATGCTTCAGAGGTTTTGCTAGCTCTTGAGTACCTGCACATGCTTGGCATTGTATATAGAGACTTAAAGCCTGAGAATCTTCTAGTCAGAGATGAAGGGCACATCATGCTCTCAGATTTCGACTTATCGCTTCGCTGCTCAGTCAACCCCACACTTGTCAAGTCCTCATCTGCTCATGCAAACAATGGCGGCAGTACTAGTGACTCAGGGAACATGTTGAGTGATGAACAAGCACCAACACAAAGTAGTGTGTCATCAACATTTTTCCCACGCATTTTGCCTTCAAGGAAGAACAGGAAGGCAAAGTCAGATTTTGGCCTCCTGGTTGGCGGAAACCGCCTTCCTGAACTCATGGCAGAACCAACCAATGTGCGCTCAATGTCATTTGTAGGGACACATGAATACCTTGCTCCTGAGATCATCAGAGGAGAAGGGCATGGTAGTGCGGTAGACTGGTGGACTTTTGGGATATTCTTGTATGAGCTTTTGCATGGAACAACACCTTTTAAAGGACAAGGATATAAGGCCACACTCTTCAATGTTGTTGGGCAGCCACTGAAGTTCCCTGAAACACCTCAGGTCAGTTCTGTGGCACGTGACCTTATAAGAGGATTGTTGGTGAAAGAACCTCAGAAGAGAATAGCATACAAAAGGGGTGCCACAGAAATAAAGCAGCACCCTTTTTTTGAGGGAGTGAATTGGGCTCTAGTTAGAAGTGCCACACCTCCCAATGTACCAGAACCTATAGACTTCTCCAAGTATGCTAGCAAAGACACAACACCACCACCAGCACCACCACCAGCAGCTGAGAAGAAGACTGGCAGATATTGCTAG 1650 0.4533 MQMSNSLGEVLKTDHSDQSSENSGNNSPTHPIKANQAAKDATTTDNSTSGDQVSKTNAKLTSKSRPQMLTPTSRNISEFNTQRQSPNTRMNSNLDPAASSPGLPTGATKGMPPNTKTSSNQGPASGTSSRSDSLESTSAPLRPHTGGDVRWEAINMASKGGPLNLSNFRLLKRIGYGDIGSVYLVELKGAKAHFAMKVMDKAALISRNKLLRAQTEREILGHLDHPFLPTLYSYFETDKFYCLVMEFCSGGDLHSLRQKQPNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVNPTLVKSSSAHANNGGSTSDSGNMLSDEQAPTQSSVSSTFFPRILPSRKNRKAKSDFGLLVGGNRLPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGQGYKATLFNVVGQPLKFPETPQVSSVARDLIRGLLVKEPQKRIAYKRGATEIKQHPFFEGVNWALVRSATPPNVPEPIDFSKYASKDTTPPPAPPPAAEKKTGRYC* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0580 549 SUPERFAMILY Protein kinase-like (PK-like) 165 529 IPR011009 -
Dod10g0580 549 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 19 534 - -
Dod10g0580 549 Gene3D Transferase(Phosphotransferase) domain 1 254 518 - -
Dod10g0580 549 Gene3D Phosphorylase Kinase; domain 1 161 253 - -
Dod10g0580 549 ProSiteProfiles Protein kinase domain profile. 168 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0580 549 PANTHER FLIPPASE KINASE 1-RELATED 19 534 - -
Dod10g0580 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Dod10g0580 549 Pfam Protein kinase domain 376 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0580 549 Pfam Protein kinase domain 169 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0580 549 MobiDBLite consensus disorder prediction 327 357 - -
Dod10g0580 549 MobiDBLite consensus disorder prediction 520 549 - -
Dod10g0580 549 SMART serkin_6 168 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0580 549 MobiDBLite consensus disorder prediction 1 99 - -
Dod10g0580 549 MobiDBLite consensus disorder prediction 110 140 - -
Dod10g0580 549 MobiDBLite consensus disorder prediction 1 147 - -
Dod10g0580 549 CDD STKc_phototropin_like 166 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0580 Dod-Chr10 18824427 18827361 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dod10g0580 Pkinase 2.2e-37 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0580 10 18824427 18827361 Dod10g0580 10 18824427 18827361 ECH