Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0107 ATGGCTACACTCATTGCTCCAAGCAAACACTCACCTGTTGAAGATGCAGAAGCTCTCCGGAAGGCCGTCAAAGGATGGGGAGCTGATGAGAAAGCCATTATAGCAATACTTGGTCATAGAGATGCTACCCAAAGGCAGCAAATCAGACAAGCATACCAAGACCTCTTTCAAGAGGATCTCATCAAACGCCTTGAGTCTGAACTCTCCGGTGACTTTGAGAGAGCCATGTACCGCTGGATATTGGAGCCTGCAGAACGTCATGCTTTGTTGGCCAATATAGCTCTTAGGAATGCTAACAAAAACTACCAAGTGATTGTGGAAACCGCATGCGCCCTTTCACCTGAAGAGCTCTTTGTTGTGAGGCGTGCCTATCACAACCGACACCAGCGTTCCTTGGAAGAAGACGTGGCTGCTAACACCAGTGGCCATCTTCGCCAGCTTTTGGTTGGGTTGGTGAGCTCATTTAGGTATGGTGGCAATGAGATCAATGCAAGATTGGCACAATCTGAAGCTGATGTTCTTCACGAGGCCATCAAAGACAAGACTAACAAACATGAAGAAGTTATCAGAATCCTTACAACAAGGAGCAAGACCCAACTCGTGGCAACTTTCAACCGCTACAGAGATGACCATGGCATTGCAATTACCAAGAAATTGTCCGATGAAGCATTTGATGACTTCCATAAGGCAGCGCACTTAGCCATTCGCTGCATCCACTGA 720 0.4722 MATLIAPSKHSPVEDAEALRKAVKGWGADEKAIIAILGHRDATQRQQIRQAYQDLFQEDLIKRLESELSGDFERAMYRWILEPAERHALLANIALRNANKNYQVIVETACALSPEELFVVRRAYHNRHQRSLEEDVAANTSGHLRQLLVGLVSSFRYGGNEINARLAQSEADVLHEAIKDKTNKHEEVIRILTTRSKTQLVATFNRYRDDHGIAITKKLSDEAFDDFHKAAHLAIRCIH* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0107 239 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Dod10g0107 239 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Dod10g0107 239 SMART annex3 182 235 IPR018502 GO:0005509|GO:0005544
Dod10g0107 239 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Dod10g0107 239 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Dod10g0107 239 Pfam Annexin 170 230 IPR018502 GO:0005509|GO:0005544
Dod10g0107 239 Pfam Annexin 90 151 IPR018502 GO:0005509|GO:0005544
Dod10g0107 239 PANTHER ANNEXIN 6 238 - -
Dod10g0107 239 SUPERFAMILY Annexin 3 238 IPR037104 GO:0005509|GO:0005544
Dod10g0107 239 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Dod10g0107 239 PRINTS Plant annexin signature 118 132 IPR009118 -
Dod10g0107 239 PRINTS Plant annexin signature 225 239 IPR009118 -
Dod10g0107 239 PRINTS Plant annexin signature 160 180 IPR009118 -
Dod10g0107 239 ProSiteProfiles Annexin repeat profile. 82 153 IPR018502 GO:0005509|GO:0005544
Dod10g0107 239 ProSiteProfiles Annexin repeat profile. 165 236 IPR018502 GO:0005509|GO:0005544
Dod10g0107 239 Gene3D Annexin 165 239 IPR037104 GO:0005509|GO:0005544
Dod10g0107 239 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Dod10g0107 239 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Dod10g0107 239 PANTHER ANNEXIN 6 238 - -
Dod10g0107 239 Gene3D Annexin 82 152 IPR037104 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0107 Dod-Chr10 3991069 3993927 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g0107 10 3991069 3993927 Dod10g0107 10 3991069 3993927 ECH
Dod10g0107 10 3991069 3993927 Dod09g0655 09 12213508 12215796 PCT