Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0015 ATGTCTTGTGCAGAAGCTAAGAGTTATGCTTGCTCTGTGTGCATGAACAGGAGACCAAGATTTGAATTGAGGAGAGATTTCACATTTGCTGAGCTGTGTGTGGCAACGCAGTGGTTCTCCCCAAAGCACTTTCTGTCAGAAGGTGGGTTCGGTTCTGTCTACAGAGGGGAGCTGCATGGAAAGAAGGTCGCTGTTAAGCGGCATAAATGCGAAAGCTTCCAAGGAGAGAAGGAATTCAAGTCTGAAGTCGATGCCCTCAGCAAAGCAAGACACGAGAATGTGGTCATGTTGTTGGGATCGTGTGCAGAAGGAAACCACAGGCTTCTTGTTTATGAATATGTCTGCAATGGCTCACTTGACCAGCATTTATCAAAACATTCTCGTGTACCACTTTGCTGGCAAGAGAGGGTGAAAGTAGCAAATGGAGCTGCCAAAGGCTTGTTATACCTGCACGAGAACAACATCATACACAGAGACATGACACCAAACAACATTCTTCTTACACATGATTATGAAGTGCTGCTAATAACGGGAATGAGCACCACGGACAAACGACTTGGAGAAAAAGGTCTAGTAGGATGGGCTAGACCATTACTAAGAGAAGGGAAATGTCAAGCACTCATTGATGGTAGGATGATGGACTCCCATGATTGTCATCAGCTTTTTTGGATGAGTCGTTTAGCTGGAAATTGCCTCAACAAGGACCCTCAGAAGCGATTGGATATGAGCACAGTGGTCAAAGCCTTAAGTCATATAGCCGAAGGCTGCAGTTGCAACATTGTACAAAGAGACCGTACCCTTTCCATCTCCAGCTCATCAAAGCCAGATGCTGATATAAGGGACTCTTCAGAATTAGGAGGTGGAAGTGAAAATTTGAGTTGA 882 0.4512 MSCAEAKSYACSVCMNRRPRFELRRDFTFAELCVATQWFSPKHFLSEGGFGSVYRGELHGKKVAVKRHKCESFQGEKEFKSEVDALSKARHENVVMLLGSCAEGNHRLLVYEYVCNGSLDQHLSKHSRVPLCWQERVKVANGAAKGLLYLHENNIIHRDMTPNNILLTHDYEVLLITGMSTTDKRLGEKGLVGWARPLLREGKCQALIDGRMMDSHDCHQLFWMSRLAGNCLNKDPQKRLDMSTVVKALSHIAEGCSCNIVQRDRTLSISSSSKPDADIRDSSELGGGSENLS* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0015 293 Gene3D Phosphorylase Kinase; domain 1 13 113 - -
Dod10g0015 293 Gene3D Transferase(Phosphotransferase) domain 1 176 270 - -
Dod10g0015 293 Gene3D Transferase(Phosphotransferase) domain 1 114 175 - -
Dod10g0015 293 MobiDBLite consensus disorder prediction 269 293 - -
Dod10g0015 293 ProSitePatterns Tyrosine protein kinases specific active-site signature. 155 167 IPR008266 GO:0004672|GO:0006468
Dod10g0015 293 PANTHER OS01G0253100 PROTEIN 9 175 IPR045271 GO:0004714|GO:0006468
Dod10g0015 293 PANTHER TYROSINE KINASE FAMILY PROTEIN 174 281 - -
Dod10g0015 293 PANTHER TYROSINE KINASE FAMILY PROTEIN 9 175 - -
Dod10g0015 293 PANTHER OS01G0253100 PROTEIN 174 281 IPR045271 GO:0004714|GO:0006468
Dod10g0015 293 ProSiteProfiles Protein kinase domain profile. 39 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod10g0015 293 SUPERFAMILY Protein kinase-like (PK-like) 18 248 IPR011009 -
Dod10g0015 293 Pfam Protein tyrosine and serine/threonine kinase 43 173 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0015 Dod-Chr10 1067286 1070919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0015 27 293 Trihelix Transcription Factor Family AT5G38560 34.337 1.66e-46 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Dod10g0015 PK_Tyr_Ser-Thr 2.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0015 - - gmx:102663919 400.593