Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2247 ATGAAGATCCAGTGCGATGTATGCAGCAAAAACCAGGCGTCTCTGTTCTGCACCGCCGACGAAGCTGCCCTCTGTGACGGCTGCGACCACCGCGTCCACCATGCCAACAAACTCGCCTCCAAACACCACCGCTTCTCTCTCTACTGCCCTTCTTCACACCAACTCCCACTCTGCGATGTTTGCCAGGAGAAGAGGGCTTTTGTGTTTTGTCAGCAAGACAGAGCGATTCTGTGCAAAGAGTGTGACCTGCCGATTCATTCAGCCAACGACCACACCAAGAATCACAGCAGGTTTCTTCTCACTGGAATTAAGCTCTCTGCTTCTGCTTCTGCTGCTGCTGCCACGCCTCGCCCATCATCGCCCTCCAATCCCAAGAACCCAGTTGCCTCACAACCACAAACCCTTGCTGTGGCCAAGGAAGTTCATCATGTTTCCTTCAACAGTGTCAGAGCCTCCAAATATCAACAATAA 471 0.5244 MKIQCDVCSKNQASLFCTADEAALCDGCDHRVHHANKLASKHHRFSLYCPSSHQLPLCDVCQEKRAFVFCQQDRAILCKECDLPIHSANDHTKNHSRFLLTGIKLSASASAAAATPRPSSPSNPKNPVASQPQTLAVAKEVHHVSFNSVRASKYQQ* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2247 156 Pfam B-box zinc finger 54 92 IPR000315 GO:0008270
Dod09g2247 156 Gene3D Classic Zinc Finger 1 101 - -
Dod09g2247 156 PANTHER B-BOX ZINC FINGER PROTEIN 21 1 134 - -
Dod09g2247 156 CDD Bbox1_BBX-like 57 100 - -
Dod09g2247 156 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Dod09g2247 156 MobiDBLite consensus disorder prediction 111 133 - -
Dod09g2247 156 SMART bboxneu5 53 100 IPR000315 GO:0008270
Dod09g2247 156 SMART bboxneu5 4 47 IPR000315 GO:0008270
Dod09g2247 156 CDD Bbox1_BBX-like 5 47 - -
Dod09g2247 156 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Dod09g2247 156 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2247 Dod-Chr9 43781817 43782403 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod09g2247 zf-B_box 9.3e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2234 08 50115542 50117912 Dod09g2247 09 43781817 43782403 PCT