Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2243 ATGGCTGGGTTCTTCTCTCTAGGTGGAAGGGGAGCTGGCCCTGGCCCACATGACAAGGAAGAAGAAGTAGTAGAAAAACAAGACCATAACACCACCACCACCACCACCAGTAGCCTATTCTTGTTCAGGAACGAGGAGATCTACAACAAGGGGTTCGAGATATGGCCACAGTCCTATCACCAGAATCAAAGCTTGAGCAACTACTACTCGTTTGGGGTGGGTCCTAGTCGTAGGAACAACAACAACAACAACAACTCCTCCAACTCCAACGTTAACGAGGAAGACGTGTCGTTCTGCGTGTCTGATGAGTCCACGAGATTTGGATTGACGGTGATGAGGTCGTCGGGAGGGTCAGCGAGCGGCATGAACTGTCAAGACTGCGGGAACCAAGCCAAGAAAGACTGTTCGCACCTCAGATGCAGGACTTGCTGTAAGAGCCGAGGGTTTCAGTGCCAAACCCACGTCAAGAGCACTTGGGTCCCAGCAGCCAAGCGCCGTGAACGACAGCAACAGCTCGCTGCGTTGCAACACCAGCAACAGCAGCAGCAATTGCGCGGCGACAGTTCTAAAAGACACAGAGACAATCAAGGAGTCGACACTCTTGCCTGCGCTCCGGTTCCCATCACCACCACAGGGTTGGAACTGGGACAATTTCCTCCAGAAGTGAACTCTCCAGCGGTGTTTCGGTGTGTGAAAGTTAGCGCAATAGACACTGCAGATGAACAGTATGCGTATCAAACGGCTGTCAACATCGGAGGGCATGTTTTCAAGGGAATTCTCTACGATCAAGGCCCCCAAGGTCCATACACTAGTACGGTTGCAGAGGGTTCTTCCGGTGGAGGAGGTGAACCTCATGAACAGCAACTTAGTCTCATAACCGTTGCTGGAACCACTGCAGCCACAACCACTGGAAACCCATTTGACCCTTCTTCACTTTACCCAGCTCCACTCAATGCTTTCATGGCTGGTACGCAATTCTTCCCACCCCCAAGGTCCTAA 999 0.5205 MAGFFSLGGRGAGPGPHDKEEEVVEKQDHNTTTTTTSSLFLFRNEEIYNKGFEIWPQSYHQNQSLSNYYSFGVGPSRRNNNNNNNSSNSNVNEEDVSFCVSDESTRFGLTVMRSSGGSASGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLAALQHQQQQQQLRGDSSKRHRDNQGVDTLACAPVPITTTGLELGQFPPEVNSPAVFRCVKVSAIDTADEQYAYQTAVNIGGHVFKGILYDQGPQGPYTSTVAEGSSGGGGEPHEQQLSLITVAGTTAATTTGNPFDPSSLYPAPLNAFMAGTQFFPPPRS* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2243 332 MobiDBLite consensus disorder prediction 1 36 - -
Dod09g2243 332 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 330 - -
Dod09g2243 332 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 217 265 IPR006511 -
Dod09g2243 332 Pfam Domain of unknown function (DUF702) 121 266 - -
Dod09g2243 332 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 330 IPR007818 GO:0003700|GO:0006355
Dod09g2243 332 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 123 165 IPR006510 -
Dod09g2243 332 MobiDBLite consensus disorder prediction 176 195 - -
Dod09g2243 332 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2243 Dod-Chr9 43715446 43717244 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Dod09g2243 DUF702 2.9e-66 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2232 08 50074886 50077190 Dod09g2243 09 43715446 43717244 PCT