Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2139 ATGAGTCTTCTTTCCAACAAGCCTTCTTCCTCTCCTTCTCCTGCGACCGGTGGTTTCGGCGACTTCAAGGGGCAGTCTCTTCAGCAGCGAAGGCTTACGAGGCAGAGGAGGCTCCGGTACCTGACCGACCATGACGCTGGTATGCAGCCGCCGCATTCCACGGAGACGTCTTCCTTGCCGGCTTCTCCTCTGCCCTCTTTCAAGTCCGCCGTGCCCCATCCACTCCCGCGTCCAGAGTCACCGTTGACCCGCCGAGCCCAGTCAACTTGTCCCTCTCCTCCCGGACACACCCATCTCGGACCTCCTCCCTTTGAACAACAACAACAACAACATCAACATCCCGTCTTTGCTTTTTCCTGTGCCACAAAGACAGCGGATCCTGATGCCGCGAGAAATCTAAGATCTTCAAGCAATTTGGGTAGATCCTCTTTTGATCCAACGGCCGCGAGTGCAAGATATGATTTGAGTGTCAATATTCCGTCTGCAAGAGTCATGGCTGGCAACATTTCATGCAAAGATCCCCGAGAAAACTCTCATGATAATGACTCTGAGACTATTTCCAACTTGAAATTGCATTCTGCAGCCAAGAGTGCCCCGACAAGCATACGCTCCAGTCCAGTTACTAGTCCACGTAGATCAAGCAATGTAGACTTCCGTGATCCCTCCATCAATTTTCCTCATGATTTTAATGAAATTTTGAGAGTGTCACCAGCTAAGACCCTTCACAGTCCAGACCGTTCTTCTCTTCGTAGCCCCGGCAAACACACTCCTTGCCTCAAACCTAATATTCAAGAGGGATCTCATCCACACAAACATTCCTCCAAAGTCTGCCCTGAACATAATGCACATCCATTGCCCCTTCCTCCTCGAGCTTCATCGCCAGCACAATCATCTACACAACATCAATCGAGCAGCATCATACATCACAATGCAGAAAATTCGCCCTCCCTGAAAGGTCAATGGCAGAAAGGAAAGCTCATTGGGCGTGGATCATTTGGAAGTGTTTATCATGCTACCAACCTAGAGACTGGAGCATCATGTGCACTGAAAGAGGTGGATCTGATTCATGATGACCCCAAATCTGCTGACTGCATAAAGCAACTAGAGCAGGAAATCAGAATTCTCCGTCAGCTACACCACCCCAACATTGTGCAGTATTATGGCAGTGAAATGGTTGGTGATCACTTGTACATATATATGGAGTATGTGCATCCTGGATCAATAAATAAATTTATGCGTGAACATTGTGGAGCTATGACGGAATCTGTGGTTCGCAATTTTACTCGGCATATTCTCTCCGGATTGGCGTACCTGCATAATACAAAGACTATCCACAGGGATATCAAAGGTGCAAACTTGCTGGTTGATGCATCTGGCATTGTCAAGCTTGCAGATTTTGGGGTGTCAAAAATTCTGACAGAGAAATCATATGAACTTTCATTGAAGGGCAGTCCCTACTGGATGGCGCCAGAGCTCATGATGGCTGCCATAAAGAAAGAATCCAATCCTGACATTGCCATGGCCATTGATATATGGAGCTTAGGGTGCACCATCATTGAAATGCTGACAGGCAAACCTCCTTGGAGCGAGTTTGAAGGGCCTCAAGCAATGTTCAAGGTGCTGCACAGATCCCCACCTATACCTGAAACTTTATCTCCTGAGGGACAGGATTTCCTTCAGCAGTGTTTCAGAAGGAACCCTGCCGATCGACCATCAGCAGCAACCCTTCTTACACACGCCTTTGTACAAAATTTGCATTATCAAGATGCTTTAATTCATTCCCAAGGCTGTCCCAAAGGAGAACCGGGATCAAGAGATAATGCACGTGGACGTAGCCCCCGACACATTTCAAAAAGTAGTCCCAGACACTCCATTAGCGCTCGGATTTTTAGCAAGATTCATAATTTAATGGGTGAAACTTCTAAAAAATATGATAATGAGGAATCTAATCATCACAGTGCATCTTCTCCTGACTCTCCTTACTCCTTCACAGAAGTTAACGGTCGTCAATCTCCCTTGAAACCTAGTACCCTGAATTACATGTCTGTTACAAGTTCTGGCACCATACCCTTCAAGGTTATGAAAATCATGAGGCACATTTGA 2103 0.4689 MSLLSNKPSSSPSPATGGFGDFKGQSLQQRRLTRQRRLRYLTDHDAGMQPPHSTETSSLPASPLPSFKSAVPHPLPRPESPLTRRAQSTCPSPPGHTHLGPPPFEQQQQQHQHPVFAFSCATKTADPDAARNLRSSSNLGRSSFDPTAASARYDLSVNIPSARVMAGNISCKDPRENSHDNDSETISNLKLHSAAKSAPTSIRSSPVTSPRRSSNVDFRDPSINFPHDFNEILRVSPAKTLHSPDRSSLRSPGKHTPCLKPNIQEGSHPHKHSSKVCPEHNAHPLPLPPRASSPAQSSTQHQSSSIIHHNAENSPSLKGQWQKGKLIGRGSFGSVYHATNLETGASCALKEVDLIHDDPKSADCIKQLEQEIRILRQLHHPNIVQYYGSEMVGDHLYIYMEYVHPGSINKFMREHCGAMTESVVRNFTRHILSGLAYLHNTKTIHRDIKGANLLVDASGIVKLADFGVSKILTEKSYELSLKGSPYWMAPELMMAAIKKESNPDIAMAIDIWSLGCTIIEMLTGKPPWSEFEGPQAMFKVLHRSPPIPETLSPEGQDFLQQCFRRNPADRPSAATLLTHAFVQNLHYQDALIHSQGCPKGEPGSRDNARGRSPRHISKSSPRHSISARIFSKIHNLMGETSKKYDNEESNHHSASSPDSPYSFTEVNGRQSPLKPSTLNYMSVTSSGTIPFKVMKIMRHI* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2139 700 MobiDBLite consensus disorder prediction 643 673 - -
Dod09g2139 700 ProSitePatterns Protein kinases ATP-binding region signature. 327 350 IPR017441 GO:0005524
Dod09g2139 700 MobiDBLite consensus disorder prediction 653 673 - -
Dod09g2139 700 SMART serkin_6 321 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2139 700 Gene3D Transferase(Phosphotransferase) domain 1 311 655 - -
Dod09g2139 700 MobiDBLite consensus disorder prediction 292 306 - -
Dod09g2139 700 MobiDBLite consensus disorder prediction 593 624 - -
Dod09g2139 700 MobiDBLite consensus disorder prediction 1 113 - -
Dod09g2139 700 MobiDBLite consensus disorder prediction 191 220 - -
Dod09g2139 700 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 24 690 - -
Dod09g2139 700 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 24 690 - -
Dod09g2139 700 SUPERFAMILY Protein kinase-like (PK-like) 298 595 IPR011009 -
Dod09g2139 700 MobiDBLite consensus disorder prediction 191 223 - -
Dod09g2139 700 MobiDBLite consensus disorder prediction 49 64 - -
Dod09g2139 700 Pfam Protein kinase domain 322 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2139 700 MobiDBLite consensus disorder prediction 240 306 - -
Dod09g2139 700 ProSiteProfiles Protein kinase domain profile. 321 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod09g2139 700 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2139 Dod-Chr9 42833545 42838199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2139 281 584 MAP Kinase Kinase Kinase AT5G66850 69.408 8.19e-153 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod09g2139 Pkinase 3.1e-67 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2113 08 48780307 48786044 Dod09g2139 09 42833545 42838199 PCT