Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2116 ATGGTGAAGAAGGCGCCACCTAAAGCTAAGGTTACCAGATTCAACTTGATCTTCCTTGCCGCCTTTCTGTTTGTTTATGCAACCTTTCTCCTCCCTCCATCTCCCTCTGAGTATCTTGAGGATGCAGCATCCCTTGTCAGGTGCTCCCTGCGCGAATGCCGTCAAAAGGTAATTAAGGCAGTAAAAAGCTTCAAAATGAAAGCAGTATTGGAGGAGGAGCCTCCAGCTATATCACAGAGGTCAGTTAAGAATGCAACTGCTACAAAGATAGAGGTACCCAGCTTCTTTGGTCAGTTAGGGAAAGGAATGAAGATAGGAATGGTGAACATGGATGATGATGATGTCAGTGAATTATGGAGGATGCATGGAGAAACGATACCGGTTTATTTTGAGAGGGTATCGCCGTTTTTCAACTGGACCGACTTGTATCCTGAGTGGATAGACGAGGAGGAAGAGAGTGATGTGCCATCATGCCCGGAGATACGTATGCCAGAGTATGCAGAATACGAGAGCATGGACGTGATCGTGGCCAAGCTACCATGCAATAAGCATCATGAAGAGGGATGGGGGAGGGACGTTTTCCGGTTGCAGGTTCATCTTATCGCGGCAAATCTGGCGGTGAAGAAGGGGAAGAAGGATTGGAGATGGAAGGCGAGGGTGGTTTTGTGGAGCAAGTGTAGACCAATGCTGGAGCTGTTTCCATGCGACCAATTGGTTATTCGGGAAGGTGAGTGGTGGTATTATAAAGCTGATGTGAGGAGTTTGGAGCACAAGGTTTCATTGCCTGTTGGGTCCTGCAAGTTGGCCTTGCCTCCCTGGGAACAAGGGATCGACGAGGTGTACGACGTGTCGAAGATCGAACGAAGCGTGAAAAGCAGAGCAAGAGCCAAACGCGAGGCTTACGCCACGGTGCTCCACTCCTCAGAAGCCTACGTCTGCGGCGCAATAACACTGGCGCAGAGCCTCATCCAAACAGGCGCCAAACGCGACCTTGTCCTCCTCATTGACAAGTCCATCTCCGCTACCAAACGCCAGGCACTCGCCTCCGCGGGCTGGAAGATCCGAATCATAACCCGAATCCGAAACCCGAAGGCCCAGAAACGAACCTACAACGAGTACAACTACAGCAAGTTCCGCCTATGGCAGCTCACGGACTACGACAAGGTCATCTTCATCGACTCCGACATCATCGTACTTCGAAACCTCGACATCCTCTTCCACTACCCGCAAATCTCGGCCACGGGCAACGACCAGTCCATCTTCAACTCGGGGATCATGGTGATCGAGCCCTCGAACTGCACGTTCCGCACGCTGATGAGCCTCCGAGAGGACATCGTTTCGTACAACGGTGGTGACCAAGGGTTTCTTAACGAGGTGTTCGTGTGGTGGCACAGGTTGCCGAGGAGGGTGAACTTCCTGAAGATTTTCTGGTCGAACACGACGCGCGAGACGAGGGTGAAGAACAGGTTGTTGGGGTCGGAGCCGCCGGAGCTGTACGCGATTCACTACTTGGGTTGGAAGCCGTGGCAGTGCTACAGGGACTATGACTGCAACTGGGACGTGGAGGGACAGTGGGTTTACGCAAGTGACGTGGCGCACCGCAGGTGGTGGAGGCTTCACGACGCCATGGATGAGAGGCTGCAGAGGATGTGCAGGCTCACGAAACGGCGTCGCACTGTGCTGAATTGGGAGAGGAGGAAGGCTCGGATGAAGCGATTGCGCAATGGACACTGGAAGATCAACATCACGGATCCTAGACGATTTGGCTCTCTTTTGATGGATTAG 1785 0.5261 MVKKAPPKAKVTRFNLIFLAAFLFVYATFLLPPSPSEYLEDAASLVRCSLRECRQKVIKAVKSFKMKAVLEEEPPAISQRSVKNATATKIEVPSFFGQLGKGMKIGMVNMDDDDVSELWRMHGETIPVYFERVSPFFNWTDLYPEWIDEEEESDVPSCPEIRMPEYAEYESMDVIVAKLPCNKHHEEGWGRDVFRLQVHLIAANLAVKKGKKDWRWKARVVLWSKCRPMLELFPCDQLVIREGEWWYYKADVRSLEHKVSLPVGSCKLALPPWEQGIDEVYDVSKIERSVKSRARAKREAYATVLHSSEAYVCGAITLAQSLIQTGAKRDLVLLIDKSISATKRQALASAGWKIRIITRIRNPKAQKRTYNEYNYSKFRLWQLTDYDKVIFIDSDIIVLRNLDILFHYPQISATGNDQSIFNSGIMVIEPSNCTFRTLMSLREDIVSYNGGDQGFLNEVFVWWHRLPRRVNFLKIFWSNTTRETRVKNRLLGSEPPELYAIHYLGWKPWQCYRDYDCNWDVEGQWVYASDVAHRRWWRLHDAMDERLQRMCRLTKRRRTVLNWERRKARMKRLRNGHWKINITDPRRFGSLLMD* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2116 594 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 296 546 IPR029044 -
Dod09g2116 594 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 1 587 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Dod09g2116 594 Pfam Glycosyl transferase family 8 304 510 IPR002495 GO:0016757
Dod09g2116 594 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 587 - -
Dod09g2116 594 CDD GT8_Glycogenin 299 543 - -
Dod09g2116 594 SUPERFAMILY Nucleotide-diphospho-sugar transferases 299 548 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2116 Dod-Chr9 42640632 42643855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2116 66 593 Glycosyltransferase AT4G33330 65.356 0.0 722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2083 08 48312460 48318589 Dod09g2116 09 42640632 42643855 PCT