Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2078 ATGGCTCCCTACCATCTCCAACTCCAACCTGAGCCACAAGACTACCCCAGGTTCCTCGTAGATGCGCTGTACTGCCCAGAAGAACACTGGGAAGAACAAGTAGGCCATGGTGATGATGATGATGATGATGAAGAGCAACTACTGGTGGCAGATGAGTGTGGTGGCACGGGCACAGTAATAAATGCACGTCCTTTGTTGCTAGAACAGGACATGTTGTGGGACGATGAGGAGCTCAAATCGCTGCTTTCCAAAGAACAAGAGAATCCGTTGTGCACGTGCCTGGAGGGCAACACGGATTTGGAGTGTGCCCGAAGGGAAGCCGTAGAGTGGATAATGAGAGTGAATGCACACTACTCCTTCTCTGCTCTCACCGCTGTTCTTGCTGTTAACTACCTTGACAGGTTCCTGTTCAGCTTCTGGTTCCAGAATGGGAAGCCCTGGATGACTCAGCTTGCTGCTGTGGCTTGCATCTCCCTCGCTGCCAAGGTCGAAGAGATCCATGTTCCTCTTTTGCTGGACCTCCAAGTGGAGGACAGTAGATACGTTTTCGAGGCCAAAACGATTCAGAGGATGGAGATTTTGGTGCTCTCAACTCTTGGGTGGAAGATGAACCCAGCAACCCCTCTCTCCTTCATTGATTATATCACGAGGAGACTCGGATTGAAGGATCATCTCTGCTGGGAGTTTCTCAAGAGATGCGAAGGCCTTCTTCTCTCTGTCATTGCAGATTCCAGGTTTATGAGTTACCTTCCTTCTGTGTTGGCAACTGCTACAATGATACACGTTGTCAATAGCGTGGAGCCTCGTCTTGGTGTTGAATACCAAGACCAGCTCCTAGGCATTCTTGGAATCAACAAGGTTATATATATATATATATATATACTTATTTTTCATCCTTTCATTAGAATTTTAGTTTCTGTGAATTTGGAGTTGATATTAAATATAGTCAAATATGGAATTGATAAACAGGACAAGGTTGATGAATGCTGCAAGCTCATGTTAGAAGTGTGGTCAAGGTACGACCAGGGGAGGAAGCAAATGCAATGCAACAAACGCAGGTTTGGGTCTGTTCCCGGTAGCCCAAACGGCGTGATGGATGCGTCGTTTAGCTGTGAGAGCTCCAACGACTCATGGGCTGTAACTGCTTCTGTTTCATCCTCGCCGGAGCCTTTGTCCAAGAAAACTAGGACTCAAGACCAGCTACTAATAAACCGTTCCAACTCAGAGTTTATCAGCATCCCTCGCTAG 1248 0.472 MAPYHLQLQPEPQDYPRFLVDALYCPEEHWEEQVGHGDDDDDDEEQLLVADECGGTGTVINARPLLLEQDMLWDDEELKSLLSKEQENPLCTCLEGNTDLECARREAVEWIMRVNAHYSFSALTAVLAVNYLDRFLFSFWFQNGKPWMTQLAAVACISLAAKVEEIHVPLLLDLQVEDSRYVFEAKTIQRMEILVLSTLGWKMNPATPLSFIDYITRRLGLKDHLCWEFLKRCEGLLLSVIADSRFMSYLPSVLATATMIHVVNSVEPRLGVEYQDQLLGILGINKVIYIYIYILIFHPFIRILVSVNLELILNIVKYGIDKQDKVDECCKLMLEVWSRYDQGRKQMQCNKRRFGSVPGSPNGVMDASFSCESSNDSWAVTASVSSSPEPLSKKTRTQDQLLINRSNSEFISIPR* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2078 415 CDD CYCLIN 104 196 IPR013763 -
Dod09g2078 415 SMART cyclin_7 109 197 IPR013763 -
Dod09g2078 415 PANTHER CYCLIN D3.1 PROTEIN 59 295 - -
Dod09g2078 415 Pfam Cyclin, C-terminal domain 207 349 IPR004367 -
Dod09g2078 415 SUPERFAMILY Cyclin-like 71 204 IPR036915 -
Dod09g2078 415 Pfam Cyclin, N-terminal domain 97 204 IPR006671 -
Dod09g2078 415 Gene3D - 92 204 - -
Dod09g2078 415 ProSitePatterns Cyclins signature. 104 135 IPR006671 -
Dod09g2078 415 Gene3D - 205 284 - -
Dod09g2078 415 PANTHER CYCLINS 59 295 IPR039361 -
Dod09g2078 415 SMART Cyclin_C_2 206 373 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2078 Dod-Chr9 42320459 42322503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2078 18 310 Core Cell Cycle Gene Families AT4G34160 51.701 1.35e-93 285
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2037 08 47710840 47713134 Dod09g2078 09 42320459 42322503 PCT