Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2075 ATGGCTTCGGCAAAGAAAGACGTGGATCGGATTAAAGGCCCATGGAGCCCAGAAGAGGACGAGGCGTTGCAAAGGCTGGTCCAGACGTACGGGCCCAGGAACTGGTCTCTGATAAGCAAGTCGATTCCTGGTCGATCCGGGAAGTCGTGCCGGTTGCGGTGGTGCAACCAGCTGTCGCCGGAGGTGGAGCACAGGCCCTTCACGCCGGACGAGGACGAGACCATCATAAGGGCGCACGCAAGTTTCGGCAACAAGTGGGCCACCATAGCACGCCTCCTCAACGGCCGCACCGACAACGCCATCAAGAACCACTGGAATTCTACCCTCAAGAGGAAATGCTCCGCCATCGCCGACCCCCTCGACGACCGCCAGCCCCTCAAGAGATCCGCCAGCGTCGGCGCTGGCACCGCCCTGCACCTCAACCCGGGAAGCCCATCCGGATCTGATTTGAGCGATTCCAGTATGCCGGCGGCCCAAGTTTTTAGGCCCCTCGCGAGGAGCGTAACCGTGGTTCCCTCGGCGCACGTCGCCGAAACTGCGTCTTCGGCCACTGATCCACCCACGTCCCTTAGCCTATCTCTCCCCGGATCCGATTCCTGCGATGCTGCTGCTAACCATGGGCCCGGGTCGAATCAGGTAGCTGGGCCCAGCCCGGCCCGGGAGAGCCCAGCAGTTTGGGTAGCACCAGCTCAGAGCGGTTACGAGAAACAATTCTTCAGCGCGGAGTTCTTGGCGGTGATGCAAGAGATGATTAGGATGGAAGTGAGGGATTACATGTCTGGGGTAGAGCATAACGGCTTGTGTAATATGCAGACCGAAGCCATCAGGAACGCCGTGGTGAAACGTATGGGAATTGGCAGGGTCGAGTAG 870 0.6 MASAKKDVDRIKGPWSPEEDEALQRLVQTYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRPFTPDEDETIIRAHASFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSAIADPLDDRQPLKRSASVGAGTALHLNPGSPSGSDLSDSSMPAAQVFRPLARSVTVVPSAHVAETASSATDPPTSLSLSLPGSDSCDAAANHGPGSNQVAGPSPARESPAVWVAPAQSGYEKQFFSAEFLAVMQEMIRMEVRDYMSGVEHNGLCNMQTEAIRNAVVKRMGIGRVE* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2075 289 MobiDBLite consensus disorder prediction 141 155 - -
Dod09g2075 289 MobiDBLite consensus disorder prediction 178 220 - -
Dod09g2075 289 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Dod09g2075 289 PANTHER MYB PROTEIN-RELATED 9 258 - -
Dod09g2075 289 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Dod09g2075 289 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 9 258 - -
Dod09g2075 289 CDD SANT 14 56 IPR001005 -
Dod09g2075 289 Gene3D - 11 63 - -
Dod09g2075 289 Pfam Myb-like DNA-binding domain 15 73 - -
Dod09g2075 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 62 IPR017930 -
Dod09g2075 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 113 IPR017930 -
Dod09g2075 289 Gene3D - 65 129 - -
Dod09g2075 289 CDD SANT 66 109 IPR001005 -
Dod09g2075 289 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Dod09g2075 289 MobiDBLite consensus disorder prediction 132 155 - -
Dod09g2075 289 MobiDBLite consensus disorder prediction 178 217 - -
Dod09g2075 289 SMART sant 63 111 IPR001005 -
Dod09g2075 289 SMART sant 11 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2075 Dod-Chr9 42238803 42240686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2075 4 289 MYB Transcription Factor Family AT4G37260 51.077 2.17e-100 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod09g2075 Myb_DNA-bind_6 4.8e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2033 08 47631129 47632268 Dod09g2075 09 42238803 42240686 PCT