Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g2067 ATGGAAAAGAAGAGGGCCACTGCTCCCACCCTAGAGGAGACTCAGCAGATGAAGAAGCAGCGTGTGGTGTTGGGGGAACTCCCCAATTTGCCCAATGCTATCGTTCCTTCAACTCTCGTTCACCACAAACTGCAATGTCGCAACGATCCCAATCTCAAGAAACCAGTTCCTACAAGAAATACCCATTCTCTTTCTTCGGTGGAAAAAGCAGTTCACAATGATCCCCATGGTTGCGAGCCTTATGTTTCCGACATCTTTACCTATCTTCGTTCTATGGAGATTGAGAAAAAGAGAAGACCAATGGTTAACTACATCGAGAAAGTTCAGAAGCATGTTACCGCTAACATGAGAGGAGTATTGGTGGATTGGTTAGTAGAGGTTGCAGAGGAGTACAATCTTCTCTCCGACACTCTTTTTCTCTCAATTTCCTACATCGATAGATTCCTATCTGTTAATGCTGTCACCAGGCCCAGGCTTCAGTTGCTGGGTGTTTCTTCCATGCTCATTGCATCGAAGTATGAAGAAATTAGCCCTCCTCATGTGCAAGACTTCTGCTACATCACTGATGATTCATACACAAAAGCAGAGGTGGTGCAGATGGAAGCTGAAATTCTCAAGTCCATGAAGTTTGAAATGGGCAACCCAAATGTTAAGACATTCCTAATGATGTATTCAGGGCTTGCTTCTGAGAATAAAAAAACTGCAAATTGTTCGCAGATCGAATTTTTAAGCTACTATCTTGCTGAGCTGAGTTTGTTGGACTATGATTGTATCAAATTCCTGCCTTCTGTGGTGGCTGCCTCAGTTATATTTCTTGCCAGATTTATTGTCTGGCCTGTGGTGCATCCTTGGACTCCATCCTTGTGTGAATGTTCGGGTTATAAATCAGCTGAATTGAAAGAATGTGTCCAAATCTTACACGACTTGTATTTGTCAAGAAGGGCAGCGTCTTTACAAGCTGTTCGTGAGAAATACAAGCAGCACAAGTTCAAATGTGTGGCAAATCTGCCTTCCCCACCAAGGATACCAAATTCCTACTTCAAAGAAGAGTGA 1053 0.4321 MEKKRATAPTLEETQQMKKQRVVLGELPNLPNAIVPSTLVHHKLQCRNDPNLKKPVPTRNTHSLSSVEKAVHNDPHGCEPYVSDIFTYLRSMEIEKKRRPMVNYIEKVQKHVTANMRGVLVDWLVEVAEEYNLLSDTLFLSISYIDRFLSVNAVTRPRLQLLGVSSMLIASKYEEISPPHVQDFCYITDDSYTKAEVVQMEAEILKSMKFEMGNPNVKTFLMMYSGLASENKKTANCSQIEFLSYYLAELSLLDYDCIKFLPSVVAASVIFLARFIVWPVVHPWTPSLCECSGYKSAELKECVQILHDLYLSRRAASLQAVREKYKQHKFKCVANLPSPPRIPNSYFKEE* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g2067 350 CDD CYCLIN 116 205 IPR013763 -
Dod09g2067 350 SUPERFAMILY Cyclin-like 215 341 IPR036915 -
Dod09g2067 350 ProSitePatterns Cyclins signature. 117 148 IPR006671 -
Dod09g2067 350 SUPERFAMILY Cyclin-like 73 212 IPR036915 -
Dod09g2067 350 PANTHER CYCLINS 14 348 IPR039361 -
Dod09g2067 350 Pfam Cyclin, N-terminal domain 84 212 IPR006671 -
Dod09g2067 350 SMART cyclin_7 122 206 IPR013763 -
Dod09g2067 350 SMART cyclin_7 219 308 IPR013763 -
Dod09g2067 350 Gene3D - 84 335 - -
Dod09g2067 350 MobiDBLite consensus disorder prediction 48 71 - -
Dod09g2067 350 SMART Cyclin_C_2 215 339 IPR004367 -
Dod09g2067 350 CDD CYCLIN 215 307 IPR013763 -
Dod09g2067 350 Gene3D - 98 213 - -
Dod09g2067 350 MobiDBLite consensus disorder prediction 54 68 - -
Dod09g2067 350 Pfam Cyclin, C-terminal domain 215 338 IPR004367 -
Dod09g2067 350 PANTHER CYCLIN-A3-1-RELATED 14 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g2067 Dod-Chr9 42160911 42162646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g2067 3 349 Core Cell Cycle Gene Families AT5G43080 54.755 1.30e-135 388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2029 08 47596218 47599705 Dod09g2067 09 42160911 42162646 PCT