Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1594 ATGGAAGGTTCAAAGCCTCCTCCTATGTTGGAGAGAAGGGCAAGGCCGCTGAAGGATCAAGCTTTGAACTGCCCAAGGTGCAACTCAACCAACACCAAATTCTGCTACTACAACAACTACAGCCTCTCACAGCCAAGATACTTTTGCAAGACTTGTAGAAGGTATTGGACTGAGGGTGGCTCCTTGAGAAATGTTCCTGTGGGTGGTGGCTCAAGGAAGAACAAGAGATCCACACCGTCATCATCATCAACATCAACAACAACACTTCCCTCACCATCATCAGCTCCATCATCGAAGAAACTTCCTGATCTGACAACACCGCCACCAAGTAGTTTCCCTCAATCTGCTTCTCAGAACCCAAAGATCCATCAAGGCCAGGATCTTAACTTAGCGTATCCCCCACAACCTCATGAGGACTACAACATATCTAAATTCATTGAGGTCCCTTACGCCACTGCTGAAGACAAGGGTCATCATCATCATACTAGTTCGTCATCACCATCTTCTCAGTTGTCTGCTATGGAGCTTCTCAAAACCGGGATTGCTTCCTCAAGGGGCTTGAATTCTTTCATGCCTATGTCACTATCAGATTCCACTACAATGTACAGTTCAGCGGGGTTTCCTATGCAAGACTTTAAGCCGGGCCTTAACTTCAGTCTAGAAGGGTTTGAGAATGGATTTGGGGGTCTTCAAGGGATTCAAGAGGGTTCTGGTGCAAGGTTGTTGTTTCCCGTGGAGGATTTGAAGCAGCAAGTTCCAAGCACTGCTGAGTTTGAGCAGAATAGAAGTCAAGGGGATTCAACTGGGTATTGGAATGGCATGTTAGGTGGAGGATCATGGTAA 843 0.4662 MEGSKPPPMLERRARPLKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSTPSSSSTSTTTLPSPSSAPSSKKLPDLTTPPPSSFPQSASQNPKIHQGQDLNLAYPPQPHEDYNISKFIEVPYATAEDKGHHHHTSSSSPSSQLSAMELLKTGIASSRGLNSFMPMSLSDSTTMYSSAGFPMQDFKPGLNFSLEGFENGFGGLQGIQEGSGARLLFPVEDLKQQVPSTAEFEQNRSQGDSTGYWNGMLGGGSW* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1594 280 MobiDBLite consensus disorder prediction 255 270 - -
Dod09g1594 280 MobiDBLite consensus disorder prediction 110 125 - -
Dod09g1594 280 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 6 276 IPR045174 GO:0003700|GO:0006355
Dod09g1594 280 MobiDBLite consensus disorder prediction 60 136 - -
Dod09g1594 280 MobiDBLite consensus disorder prediction 71 101 - -
Dod09g1594 280 Pfam Dof domain, zinc finger 19 76 IPR003851 GO:0003677|GO:0006355
Dod09g1594 280 ProSitePatterns Zinc finger Dof-type signature. 24 60 IPR003851 GO:0003677|GO:0006355
Dod09g1594 280 ProSiteProfiles Zinc finger Dof-type profile. 22 76 IPR003851 GO:0003677|GO:0006355
Dod09g1594 280 MobiDBLite consensus disorder prediction 255 280 - -
Dod09g1594 280 PANTHER DOF ZINC FINGER PROTEIN DOF1.8 6 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1594 Dod-Chr9 37726555 37729022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1594 9 280 C2C2-Dof Transcription Factor Family AT3G61850 45.704 5.92e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod09g1594 zf-Dof 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1594 - - gmx:778114 373.629