Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1395 ATGGCAAATCAAAACCCCATTTTCCAGTGCTCTTTTCTCTTTCTACTTCTCATCAACATAGCACCATTGAGCCTTGCGCAAACTCTGACTTCATGCAACGCCCTCCTTGGCTACACTCTATACACAGACCTTAAAGTCTCAGAGGTGGCTTCACTCTTCCAAATCGACCCCATATCTCTTCTCACAGCCAATGCCATTGACATCTCTTACCCTGACGTGGAGCACCACATTCTCCCTTCAAGGCTTTTCCTCAAGATCCCCATCTCATGTTCCTGCGCTGATGGGATTAGAAAATCGGTTTCCACCCGCTACAAGACTCGCCCTTCTGACACTCTTTCTTCGATTGCTGACTCTGTCTATGGAGGTCTTGTGTCTGCTGACCAACTTGCTGAGGCTAACTCCATAAGTGACCCTTCGGTGCTTGATGTGGGTCAGAGCATTACTGTGCCTCTCCCTTGCACTTGCTTCAATGGCACTGATAATTCTCTGCCTGCTATTTATTTGTCATATGTGGTTCAACCCGTTGATACTTTGGCTGCTATTGCAGCCAGGTATTTCACTACTCTCACGGATTTGATGAATGTCAATGCCATGGGAAGCACATCTGTCACTGATGGTGATATCCTTGCTGTTCCAATACCAGCTTGCGCTTCAAATTTTCCAAGATCTGCTTCTGATTTCGGGTTGCTTGTCCCTAATGGAAGTTATGCCATTACAGCAGGCCACTGTGTACAGTGTAGCTGTGGACCACGGAATCTAAATATGTACTGCATGCCAGCTTCTCTGGCCGTTTCTTGCTCCAGCATGCAATGCAAAAACAGCAATCTCATGCTTGGGAATGTTACGGTGCAACAGAGTAGTGGTGGTTGCAATGTCACTTCTTGTAGTTATGATGGTATTGTTAATGGAACCATAATGACAACGCTGTCCCCATCCCTTCAACCTCGATGTCCAGGGCCTCAGGAATTCCCTCCCCTCGTAGCCCCACCTACAGCAGTTAGCAGGGATTCGGTATTTGCACCGGCACCATCACCTCAGTCAGATGGATTTGGTCCAGCAACGCCCAAATCTTCGCTGGTGCCTTCAAGAGGGCTTCCAGGATTCCCTCCTGCAAATGGCCCTATTAGTGCGCTTTCCTCTGGTGCCTCTGCTGCTTGCTCGTTGGTTAATCCGTTACCCATGTTGACATATGCACTTGTGTTATTATTTGTGAAGTTGATGATCCCTGCAGCATTGTAA 1239 0.477 MANQNPIFQCSFLFLLLINIAPLSLAQTLTSCNALLGYTLYTDLKVSEVASLFQIDPISLLTANAIDISYPDVEHHILPSRLFLKIPISCSCADGIRKSVSTRYKTRPSDTLSSIADSVYGGLVSADQLAEANSISDPSVLDVGQSITVPLPCTCFNGTDNSLPAIYLSYVVQPVDTLAAIAARYFTTLTDLMNVNAMGSTSVTDGDILAVPIPACASNFPRSASDFGLLVPNGSYAITAGHCVQCSCGPRNLNMYCMPASLAVSCSSMQCKNSNLMLGNVTVQQSSGGCNVTSCSYDGIVNGTIMTTLSPSLQPRCPGPQEFPPLVAPPTAVSRDSVFAPAPSPQSDGFGPATPKSSLVPSRGLPGFPPANGPISALSSGASAACSLVNPLPMLTYALVLLFVKLMIPAAL* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1395 412 MobiDBLite consensus disorder prediction 337 365 - -
Dod09g1395 412 CDD LysM 169 196 IPR018392 -
Dod09g1395 412 Pfam LysM domain 170 202 IPR018392 -
Dod09g1395 412 Pfam LysM domain 104 150 IPR018392 -
Dod09g1395 412 CDD LysM 102 149 IPR018392 -
Dod09g1395 412 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 28 359 - -
Dod09g1395 412 Gene3D LysM domain 96 157 IPR036779 -
Dod09g1395 412 SUPERFAMILY LysM domain 102 151 IPR036779 -
Dod09g1395 412 ProSiteProfiles LysM domain profile. 102 149 IPR018392 -
Dod09g1395 412 ProSiteProfiles LysM domain profile. 168 211 IPR018392 -
Dod09g1395 412 SUPERFAMILY LysM domain 168 213 IPR036779 -
Dod09g1395 412 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 3 28 359 - -
Dod09g1395 412 SMART LysM_2 169 212 IPR018392 -
Dod09g1395 412 SMART LysM_2 103 150 IPR018392 -
Dod09g1395 412 Gene3D LysM domain 158 220 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1395 Dod-Chr9 35294991 35297716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1395 4 387 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 68.262 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1395 - - gmx:100808966 677.552