Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod09g0790 | ATGACCCAGCCGTCGGTGCCCCAGCCGCCGCTGGCGCCACCGCCATCGCCACCTCCGCCGCAGCCGCCGATCCCCCCGCCTCCCCAGCCCTCCGAGAGCGTCCGGGTGCGCTGCGCCGGCTGTCGCATGATCCTGACGGTGGCCCCCGGCCTGACCGAGTTCGCTTGCCCTAGCTGCCGTATGCCGCAGATGCTTCCTCCAGAGCTCATGGGTAGGGCCCACCAGGCGGCGCCGACTCCGACGCCGACGCCGCAACCGTTGCATCCGCTGCTGCCTGCTCCTCCGTCTTCACAGTCTCAGCCGCCGCACGTGCCCGCCCACGGCATTGATCCGACCAAGATCCAGCTTCCCTGCGCTTCCTGCAAGGCCATCCTCAACGTCCCTCACGGCCTCTCGCGCTTCGCTTGTCCGCAATGTAGGGTTGACCTTGCCGTCGACGTTTCCAAGGTCAAGCAGTTCTTCCCTTCCTTGCCGCCTCCGATTCCTCCCGAAGAAGTCAATGAGGTAGCTGTTGAAGTGGAGCGGGATGAGGATGAAGGAGGCATGCTTGGAGAAACATTTACAGATTATCGACCACCAAAAGTATCTATTGGACCTCAGCATCCAGATCCTGTCGTGGAGACATCTTCCTTGTCTGCAGTGCAGCCACCTGAGCCTATGTATAATCCAAAAGTAAAAGATAGTTTGGAAAGTTCAAAGGCTTTGTCATGCTTGCAAATTGAGACATTGGTCTATGCTTGCCAGAGACACATTCAACACCTCCCCAGTGGTGCCAGGGCAGGATTTTTTATTGGAGATGGAGCTGGTATAGGTAAAGGTCGAACGATCGCGGGGCTAATATGGGAGAATTGGCACCATGGAAGGAGAAAAGCATTGTGGATTTCTGTTGGTTCAGACTTGAAGTTTGATGCCAGAAGAGACTTGGATGATGTGGAAGCTACATGCATTGATGTGCATGCTTTGAACAAACTGCCTTATTCTAAGCTTGATTCAAAGTCTGTTGGGGTCAGGGAGGGAGTTGTTTTCTTGACATACAATAGTCTCATAGCATCTTCTGAGAAAGGTCGATCTCGTCTCCAACAGCTTGTGCAGTGGTGTGGACCAGGGTTTGATGGTCTTGTAATTTTTGATGAGTGTCACAAAGCAAAAAATTTGGTCCCGGAATCTGGTAGTCAGCCAACACGAACTGGAGAAGCAGTGCTTGAAATTCAGGATCGTCTGCCTGAAGCTCGTGTTGTTTATTGCTCTGCTACTGGTGCATCTGAGCCTCGCAATATGGGTTATATGGTTAGACTTGGTCTTTGGGGAGCTGGGACATCTTTCTCTGATTTTCGTGAATTTCTAGGTGCTCTTGACAGAGGGGGTGTTGGAGCTCTAGAATTAGTTGCCATGGACATGAAAGCAAGGGGGATGTATTTATGTCGAACACTTAGCTACAAGGGTTCTGAGTTTGAAGTTATTGAAGCACCACTAGAAGATGAAATGATGGATATGTATAAAAGGTCAGCAGAATTTTGGGCAGAATTACGAGTAGAATTGCTGTCGGCAAGTGCCTTCCTAAATGAAAAACCTAATTCTAGTCAGCTCTGGAGATTATATTGGGCAAGCCACCAGCGTTTCTTTAGACACATGTGTATGTCTGCAAAAGTCCCTGCTACTGTGAGACTAGCAAAGCAAGCTTTAAGTGAGGATAAGTGTGCAGTCATTGGTCTTCAGAGTACAGGAGAAGCAAGGACTGAGGAAGCTGTAACAAGATATGGTTCTGAACTTGATGACTTTGTTTCCGGACCTCGAGAATTGTTGCTTAAGTTTGTGGAAGAAAATTACCCACTACCTGAAAAACCTGAACTTCTTCCAGGGGAGGATGGTGTAAAGGAGCTCCAAAGGAAGAGGCACTTGGCAACTCCAGGAGTTTCAGTGAAAGGAAGGGTCAGAAAAGTAGCCAAGTGGCAACCTCCTAGTGATGCTGAAAGTGATGAAGAATCTGAAACTGACTCAGCTATTGAATCTACGGACTCGGATGATGAGTTTCAGATATGTGAAATTTGCACCACAGAGGAGGAAAAGAAAAAATTGCTACAATGTTCCTGCTGTGGTAAATTAGTCCATCCAGCTTGCTTGATGCCACCAATTGGTGATGTAGTACCTGAAGCGTGGTCATGCCATTTGTGCAAGGAAAAAACAGATGAATATCTTATAGCAAGACAAGCTTACATAACTGAACTCCAGAAGAGGTATGATGCTGCCTTGGAACGCAAGACAAAAATATTAGAGATAATCCGTTCTTTGGATCTTCCAAATAACCCCTTGGATGATATTATTGACCAGTTAGGAGGCCCTGACAAAGTAGCAGAAATGACAGGAAGGAGAGGCATGCTTGTGAGGGCCTCTACTGGGAAGGGTGTAACTTACCAGGCTCGTAATACAAAGGATGTCACTATGGAAATGGTTAACATGCATGAAAAGCAGCTATTTATGGACGGAAAGAAGTTAGTTGCTATTATCTCTGAAGCTGGATCAGCTGGTGTTTCTTTGCAGGCAGATAGAAGAGCCACAAATCAGAAAAGAAGGGTTCATTTAACTTTGGAACTTCCATGGAGTGCTGATCGAGCAATTCAGCAGTTTGGAAGAACTCATCGATCAAATCAAGCTTCAGCACCAGAATACAGGCTACTCTTTACTAACCTGGGTGGTGAACGGAGATTTGCATCAATTGTTGCTAAGAGATTAGAATCTCTTGGTGCTTTGACCCAAGGGGACCGCAGGGCTGGACCTACGTTAAGTGCTTATAACTATGATAGTGCTTACGGAAAGAGGGCTCTGGTGATTATGTACAAGGGAATAATGGAGCAGGATTCTCTGCCAGTTGTACCTCCGGGATGTTCGTCTGACAGGCCAGAAACTATTCAAGACTTCATTAATCAGGCAAAAGCTGCTCTTGTATCTGTTGGAATAGTTAGGGACACAACTCTTGGTAATGGTAAAGAGCTTGGAAGGTTATCCGGTCGCATTATTGATTCAGATATGCACGACGTTGGACGGTTTCTCAACCGGCTTTTGGGACTACCTCCCGAGATTCAGAATAAGATGTTTGAGTTATTTGTGAGTATCTTGGATCTTCTTGTTCAGAATGCTCGCATTGAAGGTAACCTTGACACAGGCATTGTTGACCTGAAAGCCAATGTCATTGAACTACAAGGGACTCCAAAGACTGTTCACGTTGATCAAATGACTGGGGCTTCAACGGTTCTGTTTACATTCATCTTGGATCGAGGAATCACATGGGAGTCGGCAAGTAGCATGCTGAATGAAAAGCAGAAGGATGGGCTTGGTTCAGCCAATGATGGCTTTTATGAGTCCAAGAGGGAGTGGTTGGGAAAACGGCATTTCATTTTAGCATTTGAAAGTTCTGCTGCTTCGGGTATGTTCAAAATAGTTCGCCCCGCTGTTGGAGAATCAATTCGGGAGATGCCCCTGTCTGAATTGAAAAGTAAATATAGAAAAATTTCATCCATAGAGAAGGCTCAAATTGGTTGGGAAGAAGAATATCAAGTTTCATCTAAACAGTGCATGCATGGTCCCAATTGTAAGATAGGAAATTTCTGTACAGTTGGCAGAAGATTGCAGGAAGTAAATGTCTTGGGCGGCCTCATTCTTCCTGTTTGGGGTACCATAGAAAAGGCCCTTTCTAAGCAGTCCCGCCTAAGCCATAGGAGGCTACGCGTTGTACGCATTGAAACTACTGTGGATAACCAGCGTATTGTCGGGCTTCTGGTTCCTAATGCAGCAGTTGAAACTGTTCTTCAAGATTTAGCATGGGTGCAAGAAATTGATGATTAA | 3840 | 0.4682 | MTQPSVPQPPLAPPPSPPPPQPPIPPPPQPSESVRVRCAGCRMILTVAPGLTEFACPSCRMPQMLPPELMGRAHQAAPTPTPTPQPLHPLLPAPPSSQSQPPHVPAHGIDPTKIQLPCASCKAILNVPHGLSRFACPQCRVDLAVDVSKVKQFFPSLPPPIPPEEVNEVAVEVERDEDEGGMLGETFTDYRPPKVSIGPQHPDPVVETSSLSAVQPPEPMYNPKVKDSLESSKALSCLQIETLVYACQRHIQHLPSGARAGFFIGDGAGIGKGRTIAGLIWENWHHGRRKALWISVGSDLKFDARRDLDDVEATCIDVHALNKLPYSKLDSKSVGVREGVVFLTYNSLIASSEKGRSRLQQLVQWCGPGFDGLVIFDECHKAKNLVPESGSQPTRTGEAVLEIQDRLPEARVVYCSATGASEPRNMGYMVRLGLWGAGTSFSDFREFLGALDRGGVGALELVAMDMKARGMYLCRTLSYKGSEFEVIEAPLEDEMMDMYKRSAEFWAELRVELLSASAFLNEKPNSSQLWRLYWASHQRFFRHMCMSAKVPATVRLAKQALSEDKCAVIGLQSTGEARTEEAVTRYGSELDDFVSGPRELLLKFVEENYPLPEKPELLPGEDGVKELQRKRHLATPGVSVKGRVRKVAKWQPPSDAESDEESETDSAIESTDSDDEFQICEICTTEEEKKKLLQCSCCGKLVHPACLMPPIGDVVPEAWSCHLCKEKTDEYLIARQAYITELQKRYDAALERKTKILEIIRSLDLPNNPLDDIIDQLGGPDKVAEMTGRRGMLVRASTGKGVTYQARNTKDVTMEMVNMHEKQLFMDGKKLVAIISEAGSAGVSLQADRRATNQKRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYRLLFTNLGGERRFASIVAKRLESLGALTQGDRRAGPTLSAYNYDSAYGKRALVIMYKGIMEQDSLPVVPPGCSSDRPETIQDFINQAKAALVSVGIVRDTTLGNGKELGRLSGRIIDSDMHDVGRFLNRLLGLPPEIQNKMFELFVSILDLLVQNARIEGNLDTGIVDLKANVIELQGTPKTVHVDQMTGASTVLFTFILDRGITWESASSMLNEKQKDGLGSANDGFYESKREWLGKRHFILAFESSAASGMFKIVRPAVGESIREMPLSELKSKYRKISSIEKAQIGWEEEYQVSSKQCMHGPNCKIGNFCTVGRRLQEVNVLGGLILPVWGTIEKALSKQSRLSHRRLRVVRIETTVDNQRIVGLLVPNAAVETVLQDLAWVQEIDD* | 1280 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod09g0790 | 1279 | MobiDBLite | consensus disorder prediction | 197 | 218 | - | - | |
Dod09g0790 | 1279 | MobiDBLite | consensus disorder prediction | 657 | 672 | - | - | |
Dod09g0790 | 1279 | PANTHER | STRAWBERRY NOTCH-RELATED | 31 | 1279 | IPR026741 | GO:0006355 | |
Dod09g0790 | 1279 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 823 | 928 | IPR027417 | - | |
Dod09g0790 | 1279 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 630 | 737 | IPR013083 | - | |
Dod09g0790 | 1279 | MobiDBLite | consensus disorder prediction | 644 | 672 | - | - | |
Dod09g0790 | 1279 | Pfam | C-terminal domain on Strawberry notch homologue | 768 | 1057 | IPR026937 | - | |
Dod09g0790 | 1279 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 209 | 443 | IPR027417 | - | |
Dod09g0790 | 1279 | PANTHER | OS08G0223700 PROTEIN | 31 | 1279 | - | - | |
Dod09g0790 | 1279 | MobiDBLite | consensus disorder prediction | 72 | 109 | - | - | |
Dod09g0790 | 1279 | SUPERFAMILY | FYVE/PHD zinc finger | 671 | 729 | IPR011011 | - | |
Dod09g0790 | 1279 | Gene3D | - | 229 | 430 | IPR027417 | - | |
Dod09g0790 | 1279 | SMART | PHD_3 | 679 | 725 | IPR001965 | - | |
Dod09g0790 | 1279 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Dod09g0790 | 1279 | ProSitePatterns | Zinc finger PHD-type signature. | 680 | 724 | IPR019786 | - | |
Dod09g0790 | 1279 | ProSiteProfiles | Zinc finger PHD-type profile. | 677 | 727 | IPR019787 | - | |
Dod09g0790 | 1279 | Pfam | P-loop containing NTP hydrolase pore-1 | 200 | 500 | IPR039187 | - | |
Dod09g0790 | 1279 | MobiDBLite | consensus disorder prediction | 79 | 101 | - | - | |
Dod09g0790 | 1279 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod09g0790 | Dod-Chr9 | 24595574 | 24667014 | Dispersed |