Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0660 ATGGCAGAATATTACTCATCTCTTCCTTTTCTTTTGCTCTGCCTTTTTGGCATCTCTTCCAATTCACTCTCGAAGGCTCATAATGGTGGTGGCTTTAGTGTGGAACTCATCCACCGTGAGTCCTCAATGTCACCATTCTACCTTCCCACACAAACTCAATCCCAAAGAGTAGCCAATGCCGTTCGTCGTTCCATCAACCGGGCCAATCATCTCAACAAGGCTTCTTCTATCCCCACAAAAACACCCGAAACAACCGTGGTCCCGGATCGAGGTGAGTACCTAATGGTTTACTCAGTTGGCACCCCACCGTTCAAGCTCTTCGGTATTGTTGACACGGGCAGCGACATTGTTTGGCTGCAATGCAAGCCTTGTGAGGCTTGCTACAACCAAACAACTCCAATATTCGACCCTTCAAAGTCCACAACGCACAAAACCATCCCTTGCACTTCCAAAACATGCGTGAACTCGTCAGACACCACTTGTTCCCCTGATGGTAAAAGAATTTGCCAATATAATATTGATTACAATGACCAGTCACATTCACAAGGAGATCTCGTATTGGAGACCCTCACTTTGGACTCCACAAGTGGCTCTCCAATCCCATTCCCTAAAACTTTAGTTGGATGTGGACACATAAATAGTGTGTCTTTCCGAGGGCGAAGCTCTGGCGTAGTTGGGCTTGGAGGTGGGCCTCTCTCCATTGTTACTCAATTGGGCTCTTCAATTGGTGGCAAATTCTCCTATTGTTTGGCGCCAATATTCACAGAATCCAACACCTCAAGCAAACTCAATTTCGGCGATAATGCTGTGGTTTCTGGTCGTGGGACTGTCTCAACCCCCTTGGTGTATAAACGTCTCTTTTACAACCTAACCCTGGAAGCATTTAGCGTAGGAGATAATAAACTAGACTTTGGAAGTCAAAAGGGTAACATTATAATTGACTCAGGCACAACATTGACCATTTTGCCACTGGATCTTTACAATAAGTTGGAATCAGCGGTGAAAAAGGCAGTTAAATTGGAACGTGTTGAGGACCCTTCGCACCAATTGTCCCTTTGCTACAGGGCTACATCGAAGAATCTAGAAGTTCCAATAATGACTGCACATTTCGATGGCGCGGATGTCCAATTGAATGCTCTTAACACCTTTGTTCAAGTCGATGATGAGGTTGCGTGCTTGGCTTTCGGTACAAGTGATCAAGGATTTTCCATCTTTGGTAACTTGGCACAACAGAATTTCTTGGTTGGCTATGACCTCCAAAAGAATATTGTCTCATTCAGTCCAGCAGATTGCACTAAGCAGTGA 1305 0.4513 MAEYYSSLPFLLLCLFGISSNSLSKAHNGGGFSVELIHRESSMSPFYLPTQTQSQRVANAVRRSINRANHLNKASSIPTKTPETTVVPDRGEYLMVYSVGTPPFKLFGIVDTGSDIVWLQCKPCEACYNQTTPIFDPSKSTTHKTIPCTSKTCVNSSDTTCSPDGKRICQYNIDYNDQSHSQGDLVLETLTLDSTSGSPIPFPKTLVGCGHINSVSFRGRSSGVVGLGGGPLSIVTQLGSSIGGKFSYCLAPIFTESNTSSKLNFGDNAVVSGRGTVSTPLVYKRLFYNLTLEAFSVGDNKLDFGSQKGNIIIDSGTTLTILPLDLYNKLESAVKKAVKLERVEDPSHQLSLCYRATSKNLEVPIMTAHFDGADVQLNALNTFVQVDDEVACLAFGTSDQGFSIFGNLAQQNFLVGYDLQKNIVSFSPADCTKQ* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0660 434 CDD pepsin_A_like_plant 92 431 IPR034161 -
Dod09g0660 434 Gene3D Acid Proteases 69 265 IPR021109 -
Dod09g0660 434 Gene3D Acid Proteases 266 434 IPR021109 -
Dod09g0660 434 SUPERFAMILY Acid proteases 86 431 IPR021109 -
Dod09g0660 434 Pfam Xylanase inhibitor C-terminal 288 427 IPR032799 -
Dod09g0660 434 PANTHER OS07G0603500 PROTEIN-RELATED 11 432 - -
Dod09g0660 434 Pfam Xylanase inhibitor N-terminal 93 267 IPR032861 -
Dod09g0660 434 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 311 322 IPR001969 GO:0004190|GO:0006508
Dod09g0660 434 ProSiteProfiles Peptidase family A1 domain profile. 93 427 IPR033121 -
Dod09g0660 434 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 11 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0660 Dod-Chr9 12423369 12424673 Proximal