Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0644 ATGGCTTCTTCGCGCCTTCACTCCTCTGAGACCATTAAGGGAGCAAAAGTGCTCATGGTTGGTGCTGGTGGAATTGGCTGCGAGCTCCTCAAGACCCTAGCTCTCTCCGGTTTCCGTGACATTCACATAATTGACATGGACACCATAGAAGTCAGTAACCTTAACAGACAATTTTTATTTCGACAATCCCATGTTGGGCAATCCAAGGCTAAAGTTGCTAGGGATGCTGTTTTAAAATTTAGGCCCCACATTAACATTAAACCGTACCATGCAAATGTCAAAGATCCTGAGTTCAATATGGACTTCTTCAAGCAATTTAACGTTGTTCTAAATGGACTTGACAATCTTGATGCCCGCCGACATGTGAATCGCCTGTGCTTGGCTGCTGATGTTCCTCTGGTTGAAAGTGGAACTACTGGGTTCCTTGGACAGGTCACTGTACATGTCAAGGGAAGAACAGAATGCTATGAATGTCAGCCTAAACCTGCTCCGAAGACATACCCAGTTTGCACGATCACGAGTACCCCATCAAAGTTTGTTCACTGTATTGTGTGGGCGAAGGACTTACTTTTTGCAAAGTTATTTGGAGACAAGAATCAGGAAAATGATTTAAACGTACGATCAAGCGATGCTGCCAGCTCATCAGAAAATGTAGACGATGTATTTGAACGAAAGAATGATGAAGAAATTGAACAGTATGGAAGGAAAATCTTTGATCATGTATTTGGCTACAACATTGAGTTAGCTTTATCTAATGAAGAGACATGGAAAAATCGTAATAGACCAAAACCTATATACAGCAAAGATGTCTTGTCTGACGAATTGGGCCGACAGAATGGAAATATAGACAAAAATTGTGCATCTGAGGATGTATTATCAGTTTCTGCCATGGCATCTTTGGGCATGAAGAACCCACAGGACATCTGGAGTCTTAGAGAAAATTCTAGAATATTTCTGGAAGCACTGAGACTATTTTTCACAAAAAGGGAAAAGGATATTGGTAATCTGAGCTTTGATAAAGATGATCAGTTAGCTGTAGAATTTGTTACTGCAGCTGCAAACATACGGGCTGCTTCATTTGGCATACCTCTGCACAGCCTTTTTGAAGCTAAAGGAATTGCTGGTAATATTGTGCATGCTGTTGCGACAACAAACGCTGTTGTTGCTGGGTTGATTGTCATTGAAGCAATCAAAGTGCTACAAAATGACATTAAAAGTTACAGAATGACGTATTGTCTGGAGCATCCATCAAGAAAAATGCTGCTTATGCCTGTGGAGCCATTTGAACCGAACAAATCTTGTTATGTCTGTTCTGAGACACCTTTGTTGCTTGAAATAAACACAAAACGCTCAAAGTTGAAGGACTTTGTTGAAAAGATTGTCAAGGCAAAGCTTGGGATGAACCTTCCTCTTATTATGAGCGCAGAATCCCTTCTCTATGAAGCTGGTGATGTTGAGGAAGACATGGTTGCAATTTATGCAGCCAACCTTGAAAAGGTGCTAGCTGAGCTTCCTTCTCCAGTAACTGGTGGTACATTGCTGTCAGTAGAGGATTTGCAGCAGGAATGCGTTTGCAAAATTAGCATCAAGCACAGAGAGGAATTTGATGAAGAGAAAGAACCCGATGGGATGGTTCTCTCAGGATGGACTCAACCTGTGTCAGCGGCAGAAAACAAGGAAACTGAAAAGGATGTTGAGATAGCTCTAGTTTCTTCTGGGAAGAAACGAAAAGTTGATGATGAGTCCAATATTTCAAATGCTGCTGATGAAACAAGGAAACACAAGGAATTGCAAGTTATTGACGATGAAGATGATCTTGTCATGCTCGATGGGGATTTAGACGGTTTTAAAAAGAGGAGATTGTGA 1866 0.4132 MASSRLHSSETIKGAKVLMVGAGGIGCELLKTLALSGFRDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPHINIKPYHANVKDPEFNMDFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGRTECYECQPKPAPKTYPVCTITSTPSKFVHCIVWAKDLLFAKLFGDKNQENDLNVRSSDAASSSENVDDVFERKNDEEIEQYGRKIFDHVFGYNIELALSNEETWKNRNRPKPIYSKDVLSDELGRQNGNIDKNCASEDVLSVSAMASLGMKNPQDIWSLRENSRIFLEALRLFFTKREKDIGNLSFDKDDQLAVEFVTAAANIRAASFGIPLHSLFEAKGIAGNIVHAVATTNAVVAGLIVIEAIKVLQNDIKSYRMTYCLEHPSRKMLLMPVEPFEPNKSCYVCSETPLLLEINTKRSKLKDFVEKIVKAKLGMNLPLIMSAESLLYEAGDVEEDMVAIYAANLEKVLAELPSPVTGGTLLSVEDLQQECVCKISIKHREEFDEEKEPDGMVLSGWTQPVSAAENKETEKDVEIALVSSGKKRKVDDESNISNAADETRKHKELQVIDDEDDLVMLDGDLDGFKKRRL* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0644 621 CDD Uba2_SUMO 16 437 - -
Dod09g0644 621 PIRSF SUMO_E1B 5 608 IPR030661 GO:0016925|GO:0019948
Dod09g0644 621 Gene3D - 438 610 - -
Dod09g0644 621 Gene3D Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 165 376 IPR023318 -
Dod09g0644 621 Pfam Ubiquitin-activating enzyme, SCCH domain 331 371 IPR019572 -
Dod09g0644 621 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 10 486 IPR035985 GO:0008641
Dod09g0644 621 MobiDBLite consensus disorder prediction 573 592 - -
Dod09g0644 621 Pfam ThiF family 10 435 IPR000594 -
Dod09g0644 621 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 444 535 IPR028077 -
Dod09g0644 621 Gene3D - 4 110 IPR042449 -
Dod09g0644 621 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Dod09g0644 621 PANTHER SUMO-ACTIVATING ENZYME SUBUNIT 10 555 - -
Dod09g0644 621 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 10 555 IPR045886 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0644 Dod-Chr9 11596065 11602952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0644 336 430 EF-hand Containing Proteins AT2G30110 35.000 5.10e-08 54.3