Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0641 ATGGCGGAGCAGACGACCGCTGCCGTGAACGACGGCGAACCAGAACCCAAACAGAACGACGAGCACCACGACAACAACAATGGCGACGATCCAGAATTGTTCTGCTGCTTGTTGCAACCCACCACCGCCGACGGCGATCCCGAGTATATAGGCATCCGGCGCCTCCTCCTACGGCGAAAGGCCGAGGCCGGAGTTCTTCGCCGCATAGATTGGAGATGCAATGGAATAACTTATGTGGCATACAGGAATTACATATGTAGGCCAAGGGACTGGGAAAGTTCACATGTCCCAAGCCTGCAGGGTACTCCGGGAAACAGTGGGCGATGGATTCCGCCTCCAAGTCCACTCTCCCGTTGGTCTGAGGTGGACAGCTGGAGTTCTGGGCGGGATGTGCAAAGTGCAAATCCAATATCCAATCATAGAACAAGTTTTGGCTCAACTGCAAGTGATTCTGATCGTTCACGGCATCAGGGGGTTGAGCCTGCCTATTCTTTTGTTGGCATGCATTGCATCTTTGATCAGTGCAAAGCCTCTGTCACGGTGCTAAAGTTTGGGCACATGAGTTCCGATCTACTAGCATATGGGGCATCAGATGGAACCTTGACTGTGTGCACTGTTTCTGAGAATCCTTCAGTCATCAAACAGTTAAATGGACATTCCAAAGATGTTACAGATTTTGATTTTACATCAAACAATCAGTACATTGCATCGTCTTCATTGGATAAAACTGTGAGGGTATGGGAGATAGCAAAAGGCATTTGCATACGGGTGATATATGGAGTTTCTTCACAAATGTGCATCCGTTTTCACCCTGTAAATAACAACTTCCTTTCAGTTGGCAATGCAAATAGGGAAATCAATGTGTTCAATTTTAGCACTGGAAGGGTAATTAATAAATCAGTATTTGACAGTGAAGTTACCTCTATGGACCACGATCATACTGGACATCTCATCTTTTGTGGGGATGCACAGGGATGTATATACTCAGTAAATATGAACTCCCACACAGGTGCATTATCTCGCTCTCATCGTCATCGAAGTAGCAGCAGACACAAATCTCCTGTCACAACAGTACAGTATCGGAGTTTCTCTTTACTGGCTGGAGGACCGGTGTTATTGACATGTACTCAGGATGGAAATCTGTCTTTCTTCAGTGTGGCTTTGGAGATTAAAGGATATTTAACTCTTAGATGCTCACTCAAGTTAGCTCCGCGTATACACAAAATTCAAGCTTCTTTCTGTCCTCTTCTTTCCCTTGAAAAAGGAGAATTCATAGTTGCTGGAAGCGAGGACTCAAATGTCTATTTCTATGATTTAACACGGCCAAAGCATACATGTGTAAACAAGCTACAGGGTCATCGGTTCCCTGTTATGGGCATTGCTTGGAACCATGGAGAAAACCTTTTGGCTTCGTCTGATTTTTATGGCATAGTAATTGTTTGGAAGAGAGCAAGAACGCACGAAAACAAGAATATATGGCACTAG 1485 0.4532 MAEQTTAAVNDGEPEPKQNDEHHDNNNGDDPELFCCLLQPTTADGDPEYIGIRRLLLRRKAEAGVLRRIDWRCNGITYVAYRNYICRPRDWESSHVPSLQGTPGNSGRWIPPPSPLSRWSEVDSWSSGRDVQSANPISNHRTSFGSTASDSDRSRHQGVEPAYSFVGMHCIFDQCKASVTVLKFGHMSSDLLAYGASDGTLTVCTVSENPSVIKQLNGHSKDVTDFDFTSNNQYIASSSLDKTVRVWEIAKGICIRVIYGVSSQMCIRFHPVNNNFLSVGNANREINVFNFSTGRVINKSVFDSEVTSMDHDHTGHLIFCGDAQGCIYSVNMNSHTGALSRSHRHRSSSRHKSPVTTVQYRSFSLLAGGPVLLTCTQDGNLSFFSVALEIKGYLTLRCSLKLAPRIHKIQASFCPLLSLEKGEFIVAGSEDSNVYFYDLTRPKHTCVNKLQGHRFPVMGIAWNHGENLLASSDFYGIVIVWKRARTHENKNIWH* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0641 494 MobiDBLite consensus disorder prediction 14 29 - -
Dod09g0641 494 SMART WD40_4 293 331 IPR001680 GO:0005515
Dod09g0641 494 SMART WD40_4 165 205 IPR001680 GO:0005515
Dod09g0641 494 SMART WD40_4 443 482 IPR001680 GO:0005515
Dod09g0641 494 SMART WD40_4 402 438 IPR001680 GO:0005515
Dod09g0641 494 SMART WD40_4 341 385 IPR001680 GO:0005515
Dod09g0641 494 SMART WD40_4 251 290 IPR001680 GO:0005515
Dod09g0641 494 SMART WD40_4 209 248 IPR001680 GO:0005515
Dod09g0641 494 ProSiteProfiles Trp-Asp (WD) repeats profile. 216 257 IPR001680 GO:0005515
Dod09g0641 494 MobiDBLite consensus disorder prediction 127 152 - -
Dod09g0641 494 Gene3D - 165 262 IPR015943 GO:0005515
Dod09g0641 494 Gene3D - 410 492 IPR015943 GO:0005515
Dod09g0641 494 Pfam WD domain, G-beta repeat 213 247 IPR001680 GO:0005515
Dod09g0641 494 Pfam WD domain, G-beta repeat 446 482 IPR001680 GO:0005515
Dod09g0641 494 MobiDBLite consensus disorder prediction 127 155 - -
Dod09g0641 494 PANTHER WD REPEAT-CONTAINING PROTEIN 13 18 486 - -
Dod09g0641 494 Gene3D - 263 397 IPR015943 GO:0005515
Dod09g0641 494 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 216 249 - -
Dod09g0641 494 ProSiteProfiles Trp-Asp (WD) repeats profile. 450 482 IPR001680 GO:0005515
Dod09g0641 494 MobiDBLite consensus disorder prediction 1 32 - -
Dod09g0641 494 SUPERFAMILY WD40 repeat-like 177 485 IPR036322 GO:0005515
Dod09g0641 494 ProSitePatterns Trp-Asp (WD) repeats signature. 235 249 IPR019775 -
Dod09g0641 494 PANTHER WD REPEAT PROTEIN 26-RELATED 18 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0641 Dod-Chr9 11487071 11497385 Dispersed/Transposed