Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0625 ATGAGGAAACCTGATCTGATGGGCAAAGAGAACAACAAAATGAACAATAACAACAACAACAACAACATTGTTATTAAGAGCAAGCTAAGGAAGGGTTTGTGGTCACCTGAGGAAGACGAGAAGCTGATGAGGTACATGCTGACCAATGGACAAGGTTGTTGGAGTGACATTGCTAGGAATGCTGGCCTCCAAAGGTGTGGAAAGAGTTGCCGCCTTCGTTGGATTAATTACCTGAGACCTGACCTCAAGCGTGGTGCATTCTCACCCCAAGAGGAAGATCTCATCATTCATTTGCATTCCATTCTTGGCAACAGGTGGTCTCAGATTGCAGCACGTCTCCCTGGACGCACAGACAATGAGATAAAGAATTTTTGGAACTCCACATTGAAGAAAAGGTTGAAAATTGGCACGTCAACTCCATCACCAAACAACAGTGACTCATCGGATCAGCCTACAGATGTTATGGGAGGGATCATGCCCATCAATGAGCATGACCTCATGGCCATGTGCATGGAGTCCTCGTCATCAACTTCATCAATATCATCCATGCAAGCAATGGTTTTTGCTGAGCAATATGACCATTTTCCTATGTTGATAAATAATAATAATAATCAGCATGACATGAGTGTTTCAGCAGGTTTCCCTGATCAAATTCCTGCATGCTTGACCCATATTGGTATGGTAGATGGGAATCACGGGAATTATGGTATGTTGGAGCCTAATAAAATTGGGTTAGAAAGAGACTTGTCCCTTCCTCCACTAGAGAGTAGGAGCAATATTGAGAACTACAGTGCCCCAGTTGATGTGAAAAGCCATAACAACCACTTCAATAATAGTTGCTTCAACAACACTGATCATCAGATTGATCAGGGCTCCAAAGTAGTGGAGGACCTGTTTGGGTTTGGAAATCATATTGGGCAGCAAGGGGAAAACTTAAAATTGGGAGAATGGGATTTGGAGGGTTTGATGCAAGATATATCCTCTTTTCCTTTCCTTGATTTCCAAGTTGAATAA 1014 0.427 MRKPDLMGKENNKMNNNNNNNNIVIKSKLRKGLWSPEEDEKLMRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIIHLHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRLKIGTSTPSPNNSDSSDQPTDVMGGIMPINEHDLMAMCMESSSSTSSISSMQAMVFAEQYDHFPMLINNNNNQHDMSVSAGFPDQIPACLTHIGMVDGNHGNYGMLEPNKIGLERDLSLPPLESRSNIENYSAPVDVKSHNNHFNNSCFNNTDHQIDQGSKVVEDLFGFGNHIGQQGENLKLGEWDLEGLMQDISSFPFLDFQVE* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0625 337 CDD SANT 34 78 IPR001005 -
Dod09g0625 337 PANTHER TRANSCRIPTION FACTOR MYB83 14 337 - -
Dod09g0625 337 ProSiteProfiles Myb-like domain profile. 79 129 IPR001005 -
Dod09g0625 337 SUPERFAMILY Homeodomain-like 29 125 IPR009057 -
Dod09g0625 337 PANTHER MYB DOMAIN PROTEIN 55 14 337 - -
Dod09g0625 337 Pfam Myb-like DNA-binding domain 31 78 IPR001005 -
Dod09g0625 337 Pfam Myb-like DNA-binding domain 84 128 IPR001005 -
Dod09g0625 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 78 IPR017930 -
Dod09g0625 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 133 IPR017930 -
Dod09g0625 337 ProSiteProfiles Myb-like domain profile. 26 78 IPR001005 -
Dod09g0625 337 SMART sant 30 80 IPR001005 -
Dod09g0625 337 SMART sant 83 131 IPR001005 -
Dod09g0625 337 MobiDBLite consensus disorder prediction 1 21 - -
Dod09g0625 337 CDD SANT 86 129 IPR001005 -
Dod09g0625 337 Gene3D - 85 154 - -
Dod09g0625 337 Gene3D - 28 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0625 Dod-Chr9 10877986 10880739 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dod09g0625 Myb_DNA-binding 1.2e-12 CL0123