Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod09g0595 | ATGGCCATGGCCTTGGAGCTGAAGAAGTACCTCCTCCAAGGCCTCAACTCCTTCAGCCACCTCAAGCGCGCCCACTGCCGCCTCCTCCGCCTCCACCTCCACCACGACAACTACCTCCTCAACATCCTCCTCCACCACTCCCTCCTCCTCTTCCGAGCCACCCGCTACGCCAAACTCCTCTTCTCCCAAACCAACCACCCTAACATCTACCTCTTCAACACCATGATCCGCGGCCTCGTCTCCAACGACGCCTTCACCGACTCCCTTCACCTCTACTCCTCAATGCGCATTTCCGGCTTCACCCCCGACAACTACACCTTCCCTTTCGTCCTCAAAGCATGTGCCAGGCTCTCCAATCTCTCCCTTGGCCTCAGCCTCCACTCCCTCGTCGTCAAAACGGGCTTCGACGGTGACGTGTTTGTCAAGACAAGCCTTGTCTGTTTGTACTCAAAATGCTGGCACTTAAACGATGCGCGCAAGGTGTTCGATGATATTCCCGATAAGAATGTTGTCTCGTGGACTGCGATTATTTGTGGCTATATTGAGAGTGGACTTTATGAGGAAGCTGTTGGTTTGTTTAGAGGGTTGTTGGAGATGGGTGTGACGCCTGATAGTTTCACTCTTGTGAGGGTTTTGTATGCTTGTTCTCAGTTAGGGGACTTGGTTAGTGGAGAGTGGATTGATAGGTATATGGATGAGAATGGTTTGTGTAGGAATGTGTTTGTCGCGACTTCTTTGGTTAATTTGTATGCAAAATGCGGGAGCATGGAGAAGGCGCGCCGCGTGTTTGATGGGATGCTTGAGAAGGATATTGTTTGTTGGAGCGCTGTGATTCAGGGCTATGCTTCTAATGGGATGCCAAAGGAGGCGGTTGAGTTGTTCTTTGAGATGCGGAAGGAGAATCTGAGGCCGGATTGCTATGCCATGGTGGGAGTTCTTTCTGCTTGCGCGAGGTTGGGGGCGTTGGAGTTGGGGAATTGGGCCAAGGGCTTGATGGATGCTGATGAGTTTTTGTCTAATCCCGTCTTGGGTACTGCCTTGATTGACTTGTATGCGAAATGTGGAAGCATAGTGCAGGCGTTGGAGATTTTCAGAACGATGAAGGAGAAAGATCGTGTGGTGTTTAATGCCGTGATTTCTGGACTGGCTATGAATGGACATATCAGGGCTACGTTTGGAGTGTTTGGCCAAATGGAGAAGTGTGGAATTCGGCCTGATGAGAACACTTTTGTTGGTCTACTTTGCGGGTGTACTCATGCTGGTTTGGTTGATGATGGTCGCCGTTATTTTGATAGCATGAGTCGTGTCTTTTCTGTATCTCCTACTATTGAGCATTATGGATGCATGGTGGATCTCCTAGCCCGTGCAGGGTTGTTGGTTGAAGCACAGAATTTGATCAAGAGTATGCCAATGAAGGCGAATGCTATTGTTTGGGGGGCATTGTTGGGAGGATGCAGGTTACATCGTGATGCCAAATTGGCAGAATGGGTGTTGAAGCAGCTGATTGAGTTAGAACCATGGAATTCAGGACATTATGTTCTCTTGTCAAATATTTATTCAGCAGGTCGTAGATGGGATGAAGCAGAAAAAATCAGGTCAACTTTGAATGAGAAAGGGATGCAAAAGTTACCTGGCTGCAGTTGGGTGGAGGTTGATGGTGTTGTTCATGAATTCCTTGTAGGAGACACTTCCCATCCTTTGTCACACAAGATATATGAAAAGCTTGATAGTTTGTTTAAGGACTTGAGAGAAGTTGGTTATAGTCCGACCACTGAGTTTGTGCTCTTTGATATAGAGGAGGAGGAGAAGGAGTACTTCCTTGGCTGTCATAGTGAGAAGTTAGCTGTTGCATTCGCACTGATCAGTACCGGTGCTGATGAAGTGATTCGTGTTGTTAAAAATCTTCGTGTATGTGGCGATTGTCATGAGGCCATAAAACTCATTTCAAGAGTTACGGGCAGAGAGATAATCATTAGGGATAATAACAGATTCCATTGTTTTTGCAAAGGTTCATGTTCCTGTGGAGATTATTGGTAA | 2037 | 0.4757 | MAMALELKKYLLQGLNSFSHLKRAHCRLLRLHLHHDNYLLNILLHHSLLLFRATRYAKLLFSQTNHPNIYLFNTMIRGLVSNDAFTDSLHLYSSMRISGFTPDNYTFPFVLKACARLSNLSLGLSLHSLVVKTGFDGDVFVKTSLVCLYSKCWHLNDARKVFDDIPDKNVVSWTAIICGYIESGLYEEAVGLFRGLLEMGVTPDSFTLVRVLYACSQLGDLVSGEWIDRYMDENGLCRNVFVATSLVNLYAKCGSMEKARRVFDGMLEKDIVCWSAVIQGYASNGMPKEAVELFFEMRKENLRPDCYAMVGVLSACARLGALELGNWAKGLMDADEFLSNPVLGTALIDLYAKCGSIVQALEIFRTMKEKDRVVFNAVISGLAMNGHIRATFGVFGQMEKCGIRPDENTFVGLLCGCTHAGLVDDGRRYFDSMSRVFSVSPTIEHYGCMVDLLARAGLLVEAQNLIKSMPMKANAIVWGALLGGCRLHRDAKLAEWVLKQLIELEPWNSGHYVLLSNIYSAGRRWDEAEKIRSTLNEKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLDSLFKDLREVGYSPTTEFVLFDIEEEEKEYFLGCHSEKLAVAFALISTGADEVIRVVKNLRVCGDCHEAIKLISRVTGREIIIRDNNRFHCFCKGSCSCGDYW* | 679 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod09g0595 | 678 | Pfam | PPR repeat | 345 | 370 | IPR002885 | - | |
| Dod09g0595 | 678 | Pfam | PPR repeat | 445 | 470 | IPR002885 | - | |
| Dod09g0595 | 678 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN | 3 | 671 | - | - | |
| Dod09g0595 | 678 | Pfam | E motif | 488 | 550 | IPR046848 | - | |
| Dod09g0595 | 678 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 169 | 203 | IPR002885 | - | |
| Dod09g0595 | 678 | Pfam | PPR repeat family | 67 | 116 | IPR002885 | - | |
| Dod09g0595 | 678 | Pfam | PPR repeat family | 269 | 318 | IPR002885 | - | |
| Dod09g0595 | 678 | Pfam | PPR repeat family | 168 | 214 | IPR002885 | - | |
| Dod09g0595 | 678 | Pfam | PPR repeat family | 371 | 417 | IPR002885 | - | |
| Dod09g0595 | 678 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 270 | 304 | IPR002885 | - | |
| Dod09g0595 | 678 | TIGRFAM | PPR: pentatricopeptide repeat domain | 373 | 407 | IPR002885 | - | |
| Dod09g0595 | 678 | TIGRFAM | PPR: pentatricopeptide repeat domain | 244 | 273 | IPR002885 | - | |
| Dod09g0595 | 678 | TIGRFAM | PPR: pentatricopeptide repeat domain | 71 | 103 | IPR002885 | - | |
| Dod09g0595 | 678 | TIGRFAM | PPR: pentatricopeptide repeat domain | 409 | 442 | IPR002885 | - | |
| Dod09g0595 | 678 | TIGRFAM | PPR: pentatricopeptide repeat domain | 272 | 306 | IPR002885 | - | |
| Dod09g0595 | 678 | TIGRFAM | PPR: pentatricopeptide repeat domain | 345 | 371 | IPR002885 | - | |
| Dod09g0595 | 678 | TIGRFAM | PPR: pentatricopeptide repeat domain | 171 | 205 | IPR002885 | - | |
| Dod09g0595 | 678 | Pfam | E+ motif | 555 | 580 | IPR046849 | - | |
| Dod09g0595 | 678 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-RELATED | 3 | 671 | - | - | |
| Dod09g0595 | 678 | Gene3D | Tetratricopeptide repeat domain | 343 | 574 | IPR011990 | GO:0005515 | |
| Dod09g0595 | 678 | Gene3D | Tetratricopeptide repeat domain | 72 | 228 | IPR011990 | GO:0005515 | |
| Dod09g0595 | 678 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 239 | 269 | IPR002885 | - | |
| Dod09g0595 | 678 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 371 | 405 | IPR002885 | - | |
| Dod09g0595 | 678 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 68 | 102 | IPR002885 | - | |
| Dod09g0595 | 678 | Pfam | DYW family of nucleic acid deaminases | 586 | 678 | IPR032867 | GO:0008270 | |
| Dod09g0595 | 678 | Gene3D | Tetratricopeptide repeat domain | 229 | 328 | IPR011990 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod09g0595 | Dod-Chr9 | 9788764 | 9793361 | Dispersed/Transposed |