Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0563 ATGTCTCAAGGCAATTATTATTCACAGTCCTACCCTTCTTCTTCTTCTTCTTCTTCTTCGTGTTGCTCCTCTGGATCTGACCACTCAGATGATGCTGCTGCTTCAGCTGAACTCAAGCTCTACAGAGCCTTCATCTTCTCTGCCCCAATCTTCTTCACTTTCATTCTGCTGTTCCTCTTCTACGTCTTCTATCTCCGTCCCCGAAGGGTCGATTGGTCCTCCCTTGCCATGAGAACACCGTCTAACCTTCCACTCCACCAGGACCCAACAAACAACTCCACGTGTGATACGGGGTTGAAGAAAGAATTGAGAGAGATGCTGCCCATTGTTGTGTACAAGGAAAGCTTCTCTGTCAGAGATACGCAATGCTCAGTATGCCTTTTGGACTACCAACCAGAGGACAGGCTTCAACAGATACCTGCTTGTGGCCATACATTTCACATGAGCTGCATTGATCTTTGGCTTGCCAGCCACAGCACCTGCCCTCTCTGCCGCTTGTCCCTACTAACTTCTGCTAAATCTTCAACAGAGGCATCTGATACACAGAGGCCACAGAGCAATGAAGAAACACAGGTTATGGAACTATCTGAATCAAGATCTACTAGGCATCAAGAAAACACTGTCCTCCAGAATGACTCTGGAGAAGTTGCAGTCGCCGCTCACGGCATTGATGTTGAAGGAGAAAATGAGCAAAACAATCAGTAG 705 0.4723 MSQGNYYSQSYPSSSSSSSSCCSSGSDHSDDAAASAELKLYRAFIFSAPIFFTFILLFLFYVFYLRPRRVDWSSLAMRTPSNLPLHQDPTNNSTCDTGLKKELREMLPIVVYKESFSVRDTQCSVCLLDYQPEDRLQQIPACGHTFHMSCIDLWLASHSTCPLCRLSLLTSAKSSTEASDTQRPQSNEETQVMELSESRSTRHQENTVLQNDSGEVAVAAHGIDVEGENEQNNQ* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0563 234 Pfam Ring finger domain 122 165 IPR001841 -
Dod09g0563 234 ProSiteProfiles Zinc finger RING-type profile. 123 165 IPR001841 -
Dod09g0563 234 SMART ring_2 123 164 IPR001841 -
Dod09g0563 234 MobiDBLite consensus disorder prediction 175 194 - -
Dod09g0563 234 CDD RING-H2_EL5_like 122 165 - -
Dod09g0563 234 MobiDBLite consensus disorder prediction 175 234 - -
Dod09g0563 234 PANTHER RING-H2 FINGER PROTEIN ATL7-LIKE 4 208 - -
Dod09g0563 234 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 4 208 - -
Dod09g0563 234 SUPERFAMILY RING/U-box 107 170 - -
Dod09g0563 234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 172 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0563 Dod-Chr9 8994722 8999710 Dispersed/Transposed