Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0409 ATGCTGGACAACAAAGACCCTGCGATCAAACTCTTTGGCCAGAAGATTCCCTTTCCCGGGGATGCTTTGGCTTCTGCCATTGCCGCTGGCGATGCGCCGTCGCTAGCGGCGATGGACCTTGACCGAAAGGAACAAGGAGAGGAAAATCAACAAATAGAAGACAGAGGGCTTGTTCGTGAATTAAAGGATGAAGAGGAGACAGAACAAGGAGACAACAAGGATCCTCCAGCTGATGAAGTTACTGAGAAAAAGAAAGAGGCTGATTCTCCTCCAAATGCTGCAGAGACTAATAATAACAAAAAGGATTCAGTCACATTGCCTGAGGCTATTCAGAACCCAAAGACACCTTCCATAGATGAAGAAACTGCAAAAACAAAGAATGGCAAGTCAGAGAACGAGCAAAGTGATGCAACCAACACCAACTCGCAGCAAGAGAAGACACTGAAGAAGCCAGATAAAGTGCTTCCGTGCCCACGCTGCAATAGCATGGACACCAAGTTCTGTTACTACAACAACTACAACGTCAACCAGCCACGTTACTTCTGCAAAGCATGTCAAAGATACTGGACTGCTGGTGGCACCATGAGGAATGTTCCAGTTGGGGCAGGGAGAAGGAAGAACAAGAACAGTGCCTCGCACTATCGCCATATCACCATCTCTGAGGCTCTTCAAGCTGCTAGAATTGATGCTCCTAATGGAACTCATCTCCCAACTTTGAAAACCAATGGTAGAGTCCTAAGCTTTGGATTGGATCCACCAATTTGTGATTCCATGGCATCTGTCCTTAATCTTGCAGAGAAAAAGGTTTTTAGTAATGGCACACGAAACGGGTTTCATGGCATTGAGGATCAAAGGGTTTCCATCCCTTGTAAAAGTGGGGAAAATGGTGATGACTGCTCAAGTGGATCTTCCATTACGGTTTCAAATTCTACTGGAGGAAACTGGCAAAACCACACCCCAAGAACCTTCAGTACAAACTGTACAAAGCAATGGTTTCCTTGCTCCTCAAGTTCCATGCATCCCTAG 1026 0.46 MLDNKDPAIKLFGQKIPFPGDALASAIAAGDAPSLAAMDLDRKEQGEENQQIEDRGLVRELKDEEETEQGDNKDPPADEVTEKKKEADSPPNAAETNNNKKDSVTLPEAIQNPKTPSIDEETAKTKNGKSENEQSDATNTNSQQEKTLKKPDKVLPCPRCNSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSASHYRHITISEALQAARIDAPNGTHLPTLKTNGRVLSFGLDPPICDSMASVLNLAEKKVFSNGTRNGFHGIEDQRVSIPCKSGENGDDCSSGSSITVSNSTGGNWQNHTPRTFSTNCTKQWFPCSSSSMHP* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0409 341 PANTHER CYCLIC DOF FACTOR 2 1 322 IPR045174 GO:0003700|GO:0006355
Dod09g0409 341 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 1 322 - -
Dod09g0409 341 MobiDBLite consensus disorder prediction 39 90 - -
Dod09g0409 341 MobiDBLite consensus disorder prediction 39 155 - -
Dod09g0409 341 MobiDBLite consensus disorder prediction 91 118 - -
Dod09g0409 341 ProSiteProfiles Zinc finger Dof-type profile. 155 209 IPR003851 GO:0003677|GO:0006355
Dod09g0409 341 MobiDBLite consensus disorder prediction 292 320 - -
Dod09g0409 341 ProSitePatterns Zinc finger Dof-type signature. 157 193 IPR003851 GO:0003677|GO:0006355
Dod09g0409 341 MobiDBLite consensus disorder prediction 294 320 - -
Dod09g0409 341 Pfam Dof domain, zinc finger 152 209 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0409 Dod-Chr9 6165160 6167254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0409 1 309 C2C2-Dof Transcription Factor Family AT3G47500 46.984 2.68e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod09g0409 zf-Dof 1.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0409 - - gmx:100803454 393.275