Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0275 ATGGGTCTATCTTCTCTGCATGTCTGCATGGATTCATCAGATCATTGGTTGCAGGCCACAATTCACGAGGAGGCTGGGATGGACTCTTCATCTCCATCTGGTGACATGCTCACATGCTCAAGGCCCATGATAGAGAGGAGGCTAAGACCCCCACATGACCAAGCCCTCAAGTGCCCAAGGTGTGACTCAACCCACACCAAGTTCTGCTACTACAACAACTACAGCCTCTCCCAGCCAAGGTACTTCTGCAAGACCTGCAGAAGGTACTGGACCAAAGGTGGCACTCTCAGGAACATCCCTGTTGGTGGTGGCTGCAGAAAGAACAAGAAAGTCTCTTCCAAGAAATCCAACAACAACAATAACAATGACCATCTAGCTAGTAGCAATCAAAACCAAGCACAGAATATTGCAGGACCCTCTTACCACCATCACAACCCCAAAGACCTCCAACTCTCTTTCCCAGATGTTCATCAATTTTCCCACCTCAGTAACATACTTGGGACCAATGCTGGAGAGGCACTAGGGAACCCTAATTTCATGGAGAGCAGGTATGGTATTGGCATGCTTGAGAACCCTAGGCCTATTGACTTCATGGAGAGCAAGCTGGAGGGCATAATTGGAAGCAGCAGCTCTAGGAATTTTGACTTTTTTGGAAATGGTGACATCGGGGGAATGGCTGTTGGGCTTGGAGATCATATGAACATGAATAATGCTCATCATCATAATAGCAATGGGTTGCAACCTAGTTTTCATGGTCTTTGCACTCCTGCATCATTTGGTGGCATAATGTCCCTTGATCATGGCAGCAACAACAATGGGGCTAATTACATAATGGACTCATCATGCCAGAGGCTAATGCTGCCATATGATGCTGGTAGTGAGGACCATAACAATGCCCCAATTGATGTGAAGCCAAACCCTAAGCTGTTGTCCCTTGAGTGGCAGGACCAGGGTTGCTCTGATGCAGGAAAAGAGTCATTTGGGTATCTTAACGGTCCAGGATCATGGTCCGGCATGATGAACGGCTATGGATCTTCCACCACAAACCCTTTGGTCTAA 1059 0.475 MGLSSLHVCMDSSDHWLQATIHEEAGMDSSSPSGDMLTCSRPMIERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKSNNNNNNDHLASSNQNQAQNIAGPSYHHHNPKDLQLSFPDVHQFSHLSNILGTNAGEALGNPNFMESRYGIGMLENPRPIDFMESKLEGIIGSSSSRNFDFFGNGDIGGMAVGLGDHMNMNNAHHHNSNGLQPSFHGLCTPASFGGIMSLDHGSNNNGANYIMDSSCQRLMLPYDAGSEDHNNAPIDVKPNPKLLSLEWQDQGCSDAGKESFGYLNGPGSWSGMMNGYGSSTTNPLV* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0275 352 PANTHER - 17 346 - -
Dod09g0275 352 Pfam Dof domain, zinc finger 53 110 IPR003851 GO:0003677|GO:0006355
Dod09g0275 352 ProSitePatterns Zinc finger Dof-type signature. 58 94 IPR003851 GO:0003677|GO:0006355
Dod09g0275 352 ProSiteProfiles Zinc finger Dof-type profile. 56 110 IPR003851 GO:0003677|GO:0006355
Dod09g0275 352 MobiDBLite consensus disorder prediction 101 127 - -
Dod09g0275 352 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 346 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0275 Dod-Chr9 4087967 4089676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0275 1 352 C2C2-Dof Transcription Factor Family AT5G62940 41.000 4.18e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Dod09g0275 zf-Dof 1.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0275 - - gmx:778107 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1618 05 41267508 41269804 Dod09g0275 09 4087967 4089676 PCT