Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2274 ATGGCCCTCCTAACTTTCTTGCCTGAACAATCCCACCCCAAAAATGACCAGCCCCCTAAACACAAAGCAAAGCAACACCATCACAAACAGAAGCAGAATCAGAATCAGAAGCAGAAGCAGAATCAGAAGCAAAAACAGAAACAAAAGCAACCCACATCATGGGACCAAATCAAGAATCTGATCACTTGCAAACAAATTGAAGGGTCAAGGGTGCATGACCCTTCAAAGGGTGGTGTTGGCTACTCCAAGCTAGGGTCATCTTGCAGCTCCATATGCAGCTTCAAAGATGTTGTTCATGGAAACACTAGAGTTGTACACAGGGCTGATAACTCTTCACCTGAGAGTAGCACCCTTGGTCAAGAAACTGGCCTATTGAGTAGGAAACCAGCCACCACCTCATCAACCCGGTCAGGGAAATCCAACGGTGGAGCAACCTACACGTCATCATCTTCTTCCAGAGCAATGCAGTTCAGGAAGTTATCTGGGTGTTATGAATGTCACATGATCATTGACCCTAGCAGGCTACCAATTCCGAGGAGCAGTGTGTGTGCTTGCTCTCAGTGTGGAGAGGTGTTCCCTAAGATGGAAAGCTTGGAGCTTCATCAAGCTGTTCGTCATGCTGTTTCGGAGCTGGGTCGAGAGGACTCAGGACGGAACATAGTGGAGATAATCTTCAAATCGAGCTGGCTGAAGAAGGACAATTCCATATGCAAGATCGAACGGATATTAAAGGTCCACAACACCCAGCGCACGATCCAACGGTTCGAGGATTGCAGGGATGTAGTAAAGACCCGTGCACTCAATAGCACCAAGAAAAACCCAAGGTGTGCAGCTGATGGCAATGAACTCTTGCGGTTTCATTGCACCACACTAACCTGTGCACTGGGCGCGCGTGGCTCCACTTCCCTCTGCGCCTCCGTTCCTGGCTGCGGCGTTTGTACCGTCATAAGGCATGGGTTTCAAGGTAAGTCCGGTGGTGGCGGAGAGGGTGGAAGGGGAGTGAGGACCACTGCGAGTAGCGGCAGGGCGCACGACTCAGTGGTAGTGCAGAGTGGCGAGTGTGGTGGTGGTCGAAGGGCAATGTTGGTGTGTCGAGTGGTTGCGGGGAGAGTGAGGCGCGTGGCAGAGGACGCGCCATCAGAGGAGGAGGGCGTGTCGAGTGGTGGGTGCTATGATTCTGTTGCAGGTTCTACAGGTATCTACTCCAATCTCGAAGAGTTAGTTGTTTTCAACCCACGCGCCATTCTCCCTTGTTTCGTGGTTATTTACAAGGTGCTTTCATGTTGA 1287 0.5089 MALLTFLPEQSHPKNDQPPKHKAKQHHHKQKQNQNQKQKQNQKQKQKQKQPTSWDQIKNLITCKQIEGSRVHDPSKGGVGYSKLGSSCSSICSFKDVVHGNTRVVHRADNSSPESSTLGQETGLLSRKPATTSSTRSGKSNGGATYTSSSSSRAMQFRKLSGCYECHMIIDPSRLPIPRSSVCACSQCGEVFPKMESLELHQAVRHAVSELGREDSGRNIVEIIFKSSWLKKDNSICKIERILKVHNTQRTIQRFEDCRDVVKTRALNSTKKNPRCAADGNELLRFHCTTLTCALGARGSTSLCASVPGCGVCTVIRHGFQGKSGGGGEGGRGVRTTASSGRAHDSVVVQSGECGGGRRAMLVCRVVAGRVRRVAEDAPSEEEGVSSGGCYDSVAGSTGIYSNLEELVVFNPRAILPCFVVIYKVLSC* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2274 428 MobiDBLite consensus disorder prediction 1 56 - -
Dod08g2274 428 SUPERFAMILY ADP-ribosylation 208 424 - -
Dod08g2274 428 Coils Coil 28 49 - -
Dod08g2274 428 ProSitePatterns Zinc finger C2H2 type domain signature. 183 206 IPR013087 -
Dod08g2274 428 ProSiteProfiles Zinc finger C2H2 type domain profile. 183 211 IPR013087 -
Dod08g2274 428 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 40 427 - -
Dod08g2274 428 MobiDBLite consensus disorder prediction 105 150 - -
Dod08g2274 428 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 40 427 - -
Dod08g2274 428 MobiDBLite consensus disorder prediction 19 34 - -
Dod08g2274 428 MobiDBLite consensus disorder prediction 35 56 - -
Dod08g2274 428 Gene3D - 207 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2274 Dod-Chr8 50742021 50746786 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod08g2274 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2274 08 50742021 50746786 Dod08g2274 08 50742021 50746786 ECH