Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2269 ATGGAATTAGAGATTCAAGCACAACCCATCAAATCAAGGTTTAGGCGTATCTGTGTCTTCTGTGGCACCAGTCCCGGAAAGAACCCCAGCTACAAGCTGGCTGCTATTCAACTCGGACAACAACTGGTGGAGAGGAACATCGACTTGGTTTATGGAGGAGGAAGCATTGGGTTGATGGGCCTAATCTCACAAGTCGTCTTTGACGGTGGACGCCACGTGTTAGGTGTGATTCCTAAGACTCTAATGCCGAGAGAGATTACAGGAGAGACTGTAGGAGAAGTGAGAGCTGTATCGGGGATGCACCAACGCAAGGCTGAAATGGCTCGACAAGCCGATGCATTTATTGCCTTGCCAGGTGGATATGGCACTCTGGAAGAACTATTGGAAGTGATCACCTGGGCACAACTAGGAATACATGATAAACCAGTGGGGTTGTTGAACGTGGATGGCTACTACAACTCGTTGCTGTCATTCATGGACAAAGCTGTAGACGAAGGCTTCATAACACCCGCTGCCCGGCACATTATTGTGTCTGCCCAAACTGCCCAAGAACTTATGTGCAACCTTGAGGAATATGTCCCAAAGCACTGTGGCGTAGCCCCGAAGCAAAGGTGGGAGATGGACCAACAGTTACTAAATAGCTAG 645 0.4899 MELEIQAQPIKSRFRRICVFCGTSPGKNPSYKLAAIQLGQQLVERNIDLVYGGGSIGLMGLISQVVFDGGRHVLGVIPKTLMPREITGETVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFMDKAVDEGFITPAARHIIVSAQTAQELMCNLEEYVPKHCGVAPKQRWEMDQQLLNS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2269 214 Pfam Possible lysine decarboxylase 59 186 IPR031100 -
Dod08g2269 214 Gene3D - 5 191 - -
Dod08g2269 214 TIGRFAM TIGR00730: TIGR00730 family protein 16 192 IPR005269 GO:0009691|GO:0016787
Dod08g2269 214 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 8 209 - -
Dod08g2269 214 SUPERFAMILY MCP/YpsA-like 13 192 - -
Dod08g2269 214 PANTHER LOG FAMILY PROTEIN YJL055W 8 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2269 Dod-Chr8 50663832 50669637 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2269 08 50663832 50669637 Dod08g2269 08 50663832 50669637 ECH
Dod08g2269 08 50663832 50669637 Dod09g2268 09 44000138 44002698 PCT