Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2252 ATGGACGGTTTTGATCAAAGTGGTGTGCAAAGAGGTACTAGTTGTGCATTTGTTTCTTCACCTTCTGGTGCAGTTCCTAGACCATCTAATAGACTGAATGCTACTAATCAAACTGGTTTTGCTGAGAATCTGAAACATGGAATTCCACCCTCTCACCCCAATACCAATGTTTCACCATCATCATTGCCTTATCCCCAATTTATGGCCTCCCAATCACAACCCCATTCGGGTTCTCAGAGGCTTCGTTCCCCCAGTTTGAGCCCAGGGTCGTCATCATCATCCCATTCTAGGTCTTTGTCCCAACCCTCATTTTTCTCTCTTGATTCCTTGCCCCCATTGAGTCCTTCACCGGCTGCTACCTCCTTTGATTCGGTTCTGACGGATGTGGCTATGGAGGAAAATTTGGGTGCTTCTCATGCTGCCCTTCCTGTGCCTGTTAATAGAGGTCATACCCTTCAGCTTGGACATAGTCTTCCCCCACGAAAGGGGCACCGGCGCTCTAGCAGTGATTCCCCTCTGGGGATATCTGGTTTCGTTCAATCTTACCCTCAGTTGGTGTCCCCTGGGAAAGGGAGTGATCGGGACAATTCGGCTTCTAGAGGGGAAAGCGCTGGTTTCGAGAATCAAAAGCCAATCCAGTTAGTTCTAAAGGAGCCGGCTAAGTATATGGACCGTTTTGATGGTGTTAGTGGAGAACCTATGAGTGGGAAGAAAGACGATGGCATAGATGATTTGTTTAGTGCTTACATGAATTTGGACAACATTCATCATATGAATTTTCCGGGCATGGAAGATAAGGACTTGGATAGCAGAACTAGTGGTTCCAAGACAGTTGAAAGTAGTGACAATGAAGTTGAGAGTCATGCAACTGGAAAGACAACTCCTGCTCATGGGGCCAGTTCAAGCTATTTGGAAGAAAGGAGGGAGGGTGTCAAGAGGAGTTCTAATGGTGACATTGCACCAGGTGCCCGACACAGGAGAAGCTTCTCACTGGATAGTTCCATAGGAAATTTTCATATCGAAGATGGGTCGCCTCATCTGCCTCCTTTGCAAAACCGGTTTGGTCAACTCTCTCCTAGCAATTCAATGGATGGTAAAACACCTGAAACCAGCATGGAGTTTGGAAATGGTGAATTCAGCGCAGAGGAGATAAAGAAAATAATGGAGAATGATAAACTTGCTGAAATTGCCATGTCTGATCCCAAGCGTGCAAAAAGGATTTTGGCTAATCGTCTATCAGCTGCCCGATCAAAGGAACGAAAGACGCGGTACATTTCTGAATTGGAGCAAAAGGTGCAAACTCTTCAGACAGAGACAACCACATTGTCTACTCAATTTACCAAATTACAGATGGATAACACAGAGCTCAAAAGTCTGAATAATGAGTATAAATTGAGGCTTCAAGCCTTGGAGCAGCAGTCCCAACTGAAAGATGCTCTTAATGAGACTTTGGATGCTGAAGTCCGGCGATTAAGGCGCACTGTCGCAGAACTCGGTGGGGAGTCCGTCCTCTCAACTCGAATGGCTCAACAACTTGCCATTAACCAACAAATGTACCAGTTACAGCATCGGCAGCAGCAGACAAGCCATCTCGGACATTACCAACAGCAGAACAGCCATGCCTCGGAAGAGACGCAGACTCAGTCACAGCAGATTCAACATGAAGAACTGCAATCGCAGCGGCAGAATGGCAAGGCTACTGCCTACTGA 1710 0.4661 MDGFDQSGVQRGTSCAFVSSPSGAVPRPSNRLNATNQTGFAENLKHGIPPSHPNTNVSPSSLPYPQFMASQSQPHSGSQRLRSPSLSPGSSSSSHSRSLSQPSFFSLDSLPPLSPSPAATSFDSVLTDVAMEENLGASHAALPVPVNRGHTLQLGHSLPPRKGHRRSSSDSPLGISGFVQSYPQLVSPGKGSDRDNSASRGESAGFENQKPIQLVLKEPAKYMDRFDGVSGEPMSGKKDDGIDDLFSAYMNLDNIHHMNFPGMEDKDLDSRTSGSKTVESSDNEVESHATGKTTPAHGASSSYLEERREGVKRSSNGDIAPGARHRRSFSLDSSIGNFHIEDGSPHLPPLQNRFGQLSPSNSMDGKTPETSMEFGNGEFSAEEIKKIMENDKLAEIAMSDPKRAKRILANRLSAARSKERKTRYISELEQKVQTLQTETTTLSTQFTKLQMDNTELKSLNNEYKLRLQALEQQSQLKDALNETLDAEVRRLRRTVAELGGESVLSTRMAQQLAINQQMYQLQHRQQQTSHLGHYQQQNSHASEETQTQSQQIQHEELQSQRQNGKATAY* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2252 569 PANTHER BZIP TRANSCRIPTION FACTOR 76 569 - -
Dod08g2252 569 MobiDBLite consensus disorder prediction 151 213 - -
Dod08g2252 569 MobiDBLite consensus disorder prediction 523 569 - -
Dod08g2252 569 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 76 569 - -
Dod08g2252 569 MobiDBLite consensus disorder prediction 7 42 - -
Dod08g2252 569 MobiDBLite consensus disorder prediction 261 326 - -
Dod08g2252 569 Coils Coil 418 445 - -
Dod08g2252 569 SUPERFAMILY Leucine zipper domain 402 458 IPR046347 GO:0003700|GO:0006355
Dod08g2252 569 Pfam bZIP transcription factor 402 460 IPR004827 GO:0003700|GO:0006355
Dod08g2252 569 MobiDBLite consensus disorder prediction 169 206 - -
Dod08g2252 569 SMART brlzneu 398 462 IPR004827 GO:0003700|GO:0006355
Dod08g2252 569 MobiDBLite consensus disorder prediction 49 103 - -
Dod08g2252 569 Gene3D - 401 463 - -
Dod08g2252 569 CDD bZIP_plant_RF2 403 475 IPR044759 GO:0003700|GO:0006355
Dod08g2252 569 Coils Coil 453 501 - -
Dod08g2252 569 MobiDBLite consensus disorder prediction 1 103 - -
Dod08g2252 569 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 400 463 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2252 Dod-Chr8 50319479 50323903 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod08g2252 bZIP_1 5.1e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2252 08 50319479 50323903 Dod08g2252 08 50319479 50323903 ECH