Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2234 ATGAAGATCCAGTGCGACGTGTGCAGCAAGGACGAGGCGTCGGTGTTCTGCACCGCCGACGAAGCCGCCCTCTGTGACGGCTGCGACCACCGCGTCCACCACGCCAACAAGCTCGCCTCCAAACACCAACGCTTCTCCCTTCATCGCCCTTCCTCAAAACAACACCACCCTCTATGTGATATTTGCAAGGAAAGGAGGGCCTTCGTGTTCTGCCAACAAGACAGGGCGATTCTGTGCAAGGAGTGTGACTTGCCTGTTCATTCAGCCAATGAGCACACTAAGAAGCATAGCAGGTTCCTTCTCACAGGTGTTAAGCTCTCTGATGTAGCCAAGCTCTATTCATCGACACCGTCCAATTCCAATAACACCACCCTTTTGACTAATAGTGGTGACTCTAGTAATTCTATGCTGAATTCTAAAGCTCCTTCAGCAACATCAACACCTCCTGTTAGTGGGGGAAGAAGCATGGTTGCTGTTGAAGCAGGTGGAGGTGGTTCCACTGCTACTAGTAGCATATCTGAGTACTTGATAGAGACTATACCTGGCTGGCAGGTTGAAGACTTTCTTGATTCTTCTAACAACTCTGCTCCCTTCGGTTTCTCTAAGAGTGATGACATGTTGCCAGTGTTTGATGCTGATATTGTGGACAATTTGGTTTCCTTCTCAACGGAGAGTATGGGAATTTGGGTTCCACAAGCACCACCTCCTTTATATCCTTCACAAATATTGGATCATACGCATATGGGTCAGTGTGAGACAAAGGAAGCTACCACCACCAACATCAAAGGGAGTAGCAGATCAAGGTTGAGGGATGATAATTTCATTGTTCCACAAATAAGCCCCAACTCCATCTCCAAGAGACCAAGATTTCTATGGTAG 879 0.479 MKIQCDVCSKDEASVFCTADEAALCDGCDHRVHHANKLASKHQRFSLHRPSSKQHHPLCDICKERRAFVFCQQDRAILCKECDLPVHSANEHTKKHSRFLLTGVKLSDVAKLYSSTPSNSNNTTLLTNSGDSSNSMLNSKAPSATSTPPVSGGRSMVAVEAGGGGSTATSSISEYLIETIPGWQVEDFLDSSNNSAPFGFSKSDDMLPVFDADIVDNLVSFSTESMGIWVPQAPPPLYPSQILDHTHMGQCETKEATTTNIKGSSRSRLRDDNFIVPQISPNSISKRPRFLW* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2234 292 SMART bboxneu5 54 101 IPR000315 GO:0008270
Dod08g2234 292 SMART bboxneu5 4 47 IPR000315 GO:0008270
Dod08g2234 292 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 289 - -
Dod08g2234 292 Gene3D Classic Zinc Finger 1 100 - -
Dod08g2234 292 ProSiteProfiles Zinc finger B-box type profile. 54 101 IPR000315 GO:0008270
Dod08g2234 292 MobiDBLite consensus disorder prediction 116 152 - -
Dod08g2234 292 MobiDBLite consensus disorder prediction 116 168 - -
Dod08g2234 292 CDD Bbox1_BBX-like 5 47 - -
Dod08g2234 292 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 289 - -
Dod08g2234 292 CDD Bbox1_BBX-like 58 101 - -
Dod08g2234 292 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2234 Dod-Chr8 50115542 50117912 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod08g2234 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2234 08 50115542 50117912 Dod08g2234 08 50115542 50117912 ECH
Dod08g2234 08 50115542 50117912 Dod09g2247 09 43781817 43782403 PCT