Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2231 ATGGCTCGCAACTCTGTCTTCCTCCCACTTCTCTTCCTCCTCTTCTCCGTCGCGGCCGCCGTCGCCGTCAACCGAATCGACGACGAAGATGAGCCCCTCATCCGCCAAGTAACCGACGGCGCCGTCAACAACGACGATCACCACCTGCTCAACGCCGAGCACCACTTCACAACCTTCAAGTCAAAGTTCGGCAAATCTTACGCCACTCAAGAGGAGCACGACTACCGCTTCGGCGTCTTCAGGTCGAATCTGAGGAGGGCGAGGCTGCACGCGAAGCTGGACCCGACGGCGGAGCACGGAGTGACGAAGTTCTCAGATCTGACGCCGGCCGAGTTCAGGAGGCAGTTCATTGGGCTGAAGCCGCTGAGGCTTCCGGCGGACGCTCACAACGCTCCGATCTTGCCGACGAGCGATCTTCCTGAGGATTTCGATTGGAGAGATAAAGGAGCTGTCACTGGCGTCAAGGACCAGGGCTCGTGTGGTTCCTGTTGGGCGTTTAGTACCACGGGAGCTTTGGAAGGAGCTCACTTTCTGGCCACCGGAGAGCTTGTGAGTCTCAGTGAGCAACAGCTTGTGGATTGTGACCATGTGTGTGATCCTGAACAGTATGGATCATGTGACTCGGGCTGCAATGGTGGGTTGATGAACAACGCTTTCGAGTACATACTCCAGGCCGGGGGAGTTCAGCGAGAAAAGGACTATCCTTACTCTGGAAGAGATGGCACCTGCAAATTTGACAAGAGCAAAATTGCAGCTTCCGTATCTAATTTCAGTGTGGTTTCCCTTGATGAGGAACAAATTGCTGCAAATCTAGTGAAGAATGGCCCTCTTGCAGTTGGCATCAACGCAGTGTTTATGCAGACATACATAGGTGGAGTCTCATGCCCATACATCTGTGGGAAGAGTTTGGATCATGGGGTTCTCCTTGTTGGTTATGGCGCTGCAGGATATGCTATCATTCGGTTCAAGGACAAGCCATACTGGATCATCAAGAATTCATGGGGCGAGAACTGGGGAGAGAGTGGATATTACAAGATCTGCAGAGGCAAGAATGTGTGTGGAGTGGATTCCATGGTCTCAACTGTAGCAGCTGCTGTTGGCACATCTAGCAATTAA 1116 0.5305 MARNSVFLPLLFLLFSVAAAVAVNRIDDEDEPLIRQVTDGAVNNDDHHLLNAEHHFTTFKSKFGKSYATQEEHDYRFGVFRSNLRRARLHAKLDPTAEHGVTKFSDLTPAEFRRQFIGLKPLRLPADAHNAPILPTSDLPEDFDWRDKGAVTGVKDQGSCGSCWAFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEQYGSCDSGCNGGLMNNAFEYILQAGGVQREKDYPYSGRDGTCKFDKSKIAASVSNFSVVSLDEEQIAANLVKNGPLAVGINAVFMQTYIGGVSCPYICGKSLDHGVLLVGYGAAGYAIIRFKDKPYWIIKNSWGENWGESGYYKICRGKNVCGVDSMVSTVAAAVGTSSN* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2231 371 Gene3D Cysteine proteinases 25 363 - -
Dod08g2231 371 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 327 346 IPR025661 -
Dod08g2231 371 Pfam Cathepsin propeptide inhibitor domain (I29) 56 112 IPR013201 -
Dod08g2231 371 SUPERFAMILY Cysteine proteinases 53 362 IPR038765 -
Dod08g2231 371 SMART pept_c1 139 363 IPR000668 GO:0006508|GO:0008234
Dod08g2231 371 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 157 168 IPR000169 -
Dod08g2231 371 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 303 313 IPR025660 -
Dod08g2231 371 Pfam Papain family cysteine protease 139 361 IPR000668 GO:0006508|GO:0008234
Dod08g2231 371 CDD Peptidase_C1A 140 362 IPR039417 -
Dod08g2231 371 SMART Inhibitor_I29_2 56 112 IPR013201 -
Dod08g2231 371 PRINTS Papain cysteine protease (C1) family signature 327 333 IPR000668 GO:0006508|GO:0008234
Dod08g2231 371 PRINTS Papain cysteine protease (C1) family signature 157 172 IPR000668 GO:0006508|GO:0008234
Dod08g2231 371 PRINTS Papain cysteine protease (C1) family signature 305 315 IPR000668 GO:0006508|GO:0008234
Dod08g2231 371 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 33 364 - -
Dod08g2231 371 PANTHER CYSTEINE PROTEASE RD19C-RELATED 33 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2231 Dod-Chr8 50055614 50059188 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2231 08 50055614 50059188 Dod08g2231 08 50055614 50059188 ECH