Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2227 ATGGCAGCAGAAGAGGGACAAGTCATTGGTGTGCACACCGTTGAGGCTTGGAAGGAGCATCTCCAGAAAGGAAACGACTCCAAAAAACTGATTGTGGTGGATTTTACTGCTACTTGGTGTGGGCCATGCCGTTTCATTTCCCCAGTTTTTGCAGAGATTGCTAAGAAGACACCACAAGTCATCTTCCTCAAGGTGGATGTGGATGAATTGAGGTCTGTTGCTGAGGAGTGGGGGGTTGAGGCTATGCCAACCTTCCTCTTCTTGAAAGAAGGCAAGCCAGTGGAGAGGGTGGTTGGTGCTAAGAAGGATGAGCTACAAATAGTAATAAACAAGCATGCTTGA 342 0.4766 MAAEEGQVIGVHTVEAWKEHLQKGNDSKKLIVVDFTATWCGPCRFISPVFAEIAKKTPQVIFLKVDVDELRSVAEEWGVEAMPTFLFLKEGKPVERVVGAKKDELQIVINKHA* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2227 113 ProSitePatterns Thioredoxin family active site. 32 50 IPR017937 -
Dod08g2227 113 CDD TRX_family 19 106 - -
Dod08g2227 113 Pfam Thioredoxin 11 110 IPR013766 -
Dod08g2227 113 PANTHER THIOREDOXIN H-TYPE-LIKE ISOFORM X1 3 113 - -
Dod08g2227 113 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Dod08g2227 113 TIGRFAM thioredoxin: thioredoxin 25 112 IPR005746 GO:0015035
Dod08g2227 113 Gene3D Glutaredoxin 1 113 - -
Dod08g2227 113 SUPERFAMILY Thioredoxin-like 5 112 IPR036249 -
Dod08g2227 113 PRINTS Thioredoxin family signature 39 48 - -
Dod08g2227 113 PRINTS Thioredoxin family signature 31 39 - -
Dod08g2227 113 PRINTS Thioredoxin family signature 78 89 - -
Dod08g2227 113 PANTHER THIOREDOXIN 3 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2227 Dod-Chr8 49987210 49989084 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2227 08 49987210 49989084 Dod08g2227 08 49987210 49989084 ECH
Dod08g2227 08 49987210 49989084 Dod09g2233 09 43586389 43588292 PCT