Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2223 ATGAGCGCATTCCCTCTCTACGGTTCGGTAATTCACCATCCACGATCATCATCACCGTTACTTCCGGTGATTCAAGAACGCTACTATCTCCCATCCTCCATTCCTATTGGCCCCTTCTTCCCCTTCAGGAACAACCGGAGCAACAGGTTCCCCTCCACCACTTCCGTTCTCCAACGCGACCACCATGGACTCATATCCTCCTCCGACTCAAACGACACCGTTTCATCTCAAACCGCAACTACAACACACACTGAAGAAGAAGAAGCAGCAGCAGCAGCTCCATTAGGCAGTGTTGTTGCTGACACGAAATCGGAAGAAAAAGTATCGAAGCTTCGGAAGAGGAAAGAGGAAGAAGAAGAAGAAGACAGTTTCGATAACCGCTTCAAGCTCCGAAATGGAAGGGAGGTGTTTGAAGAGAAAGGGTACCTGGTAGGAGTTGAGAGGAAGGGTGATGGTGAGGATTTGTTTGGGATAGAAGAATCTCTGAGGGAATTGGAACAGCTAGCTGACACTGCTGGCTTGAAGGTTGTTGCCTCTACCTACCAAAAGCTTACTTCTCCAAACCCCAGAACATACATTGGCTCCGGTAAGGTTTCTGAAATTAAGAGTGCAATTCATGCATTGGACGTTGAAACTGTGATCTTCGATGATGAGCTGTCAGCTGGGCAATTGCGCAACTTGGAGAAGGTTTTTGGCGGAGATGTGAGAGTTTGTGATAGAACTGCTCTCATCCTTGATATATTTAATCAGCGAGCAGCAACACATGAAGCATCTTTACAGGTTTCATTAGCACAAATGGAATACCAACTACCTCGTCTAACAAAAATGTGGACTCATCTCGAGCGTCAATCAGGAGGAAAGGTGAAGGGAATGGGAGAAAAACAAATAGAAGTGGACAAGCGTATTTTGCGTAACCAAATTGGTGCTATCAAGAAAGAGCTAGAATCTGTTAGGAAACACCGAAAGCAGTACCGTAACAGGCGTTTCTCAGTGCCTGTGCCAGTGGTATCCTTGGTTGGTTACACAAATGCTGGTAAGAGTACACTTCTAAATCAATTAACTGGGGCAGATGTTCTTGCTGAGGATAAATTATTTGCAACTTTAGATCCAACTACGAGGAGGGTACAGCTGAAGAATGGAAAGGAATTTCTCCTTACAGACACTGTTGGTTTTATTCAGAAGTTACCTACTACACTAGTTGCTGCCTTTAGAGCTACGCTGGAGGAGATATCAGAGTCATCACTTTTGGTGCATGTAGTTGATATCAGTCACCCCCTTGCAGAGCAACAAATAAATGCTGTGGACAAAGTTCTGTCAGAACTAAATGTATCATCGATTCCAAGATTGATGGTCTGGAACAAGGTTGATAAAGCTTGTGATCCCCAGAAAATCAGGCTAGAAGCTGAAAAAAGAGATGATGTTGTATGCATATCTGCTTTAACTGGTGATGGCTTACCAGAATTCTGTAATGCAGTTCAAGACAAACTAAAGGACTCCATGGTATGGATTGAAGCTTTGGTACCATTTGAAAATGGGGACCTTCTCAGCACTATTCACCAGGTTGGAATGGTTGAGAAAGCTGAATATACAGAGCGAGGGACATATATCAAGGCACATGTGCCCCTGCGTTTTGCAAGATTGCTTACACCCATGAGGCAACTCTGTGTATCACGGCCTTAA 1680 0.4452 MSAFPLYGSVIHHPRSSSPLLPVIQERYYLPSSIPIGPFFPFRNNRSNRFPSTTSVLQRDHHGLISSSDSNDTVSSQTATTTHTEEEEAAAAAPLGSVVADTKSEEKVSKLRKRKEEEEEEDSFDNRFKLRNGREVFEEKGYLVGVERKGDGEDLFGIEESLRELEQLADTAGLKVVASTYQKLTSPNPRTYIGSGKVSEIKSAIHALDVETVIFDDELSAGQLRNLEKVFGGDVRVCDRTALILDIFNQRAATHEASLQVSLAQMEYQLPRLTKMWTHLERQSGGKVKGMGEKQIEVDKRILRNQIGAIKKELESVRKHRKQYRNRRFSVPVPVVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQLKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLAEQQINAVDKVLSELNVSSIPRLMVWNKVDKACDPQKIRLEAEKRDDVVCISALTGDGLPEFCNAVQDKLKDSMVWIEALVPFENGDLLSTIHQVGMVEKAEYTERGTYIKAHVPLRFARLLTPMRQLCVSRP* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2223 559 CDD HflX 293 496 IPR030394 GO:0005525
Dod08g2223 559 Gene3D - 252 319 - -
Dod08g2223 559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 334 506 IPR027417 -
Dod08g2223 559 Pfam GTP-binding GTPase N-terminal 159 248 IPR025121 -
Dod08g2223 559 Coils Coil 307 327 - -
Dod08g2223 559 MobiDBLite consensus disorder prediction 63 125 - -
Dod08g2223 559 Pfam HflX C-terminal domain 466 534 IPR045498 -
Dod08g2223 559 Gene3D - 333 501 IPR027417 -
Dod08g2223 559 PANTHER GTP-BINDING PROTEIN 6-RELATED 106 544 - -
Dod08g2223 559 Gene3D - 153 251 IPR042108 -
Dod08g2223 559 TIGRFAM GTP_HflX: GTP-binding protein HflX 155 495 IPR016496 GO:0005525
Dod08g2223 559 TIGRFAM small_GTP: small GTP-binding protein domain 335 487 IPR005225 GO:0005525
Dod08g2223 559 Pfam 50S ribosome-binding GTPase 336 454 IPR006073 GO:0005525
Dod08g2223 559 ProSiteProfiles HflX-type guanine nucleotide-binding (G) domain profile. 334 500 IPR030394 GO:0005525
Dod08g2223 559 PANTHER GTP-BINDING PROTEIN HFLX 106 544 IPR016496 GO:0005525
Dod08g2223 559 PRINTS GTP1/OBG GTP-binding protein family signature 336 356 IPR006073 GO:0005525
Dod08g2223 559 PRINTS GTP1/OBG GTP-binding protein family signature 403 421 IPR006073 GO:0005525
Dod08g2223 559 MobiDBLite consensus disorder prediction 103 125 - -
Dod08g2223 559 Hamap GTPase HflX [hflX]. 162 525 IPR016496 GO:0005525
Dod08g2223 559 Pfam GTP-binding GTPase Middle Region 251 328 IPR032305 -
Dod08g2223 559 Coils Coil 101 121 - -
Dod08g2223 559 MobiDBLite consensus disorder prediction 63 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2223 Dod-Chr8 49954420 49960155 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g2223 08 49954420 49960155 Dod08g2223 08 49954420 49960155 ECH