Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g2212 ATGTCCGGTCCGCTAGATCGGTTCGCACGCCCTTGCTTTGAAGGCTTTTATGGTAATGATGAAAGGAGAGAGCGGAAATCGGATTTTGAGAATTCAGAAGATGACCGGCGGACGCGAATTGGAAGCCTGAAGAAGAAGGCGATCAATGCATCCAGCAAATTCAGGCATTCTCTTCGGAAGAAGAGCAGTAGGAGGAAGAACGCCAGCCGGAGCAATTCTGTCTCCATCGAGGATGTTCGAGATGTTAAGGACCTCCAGGCAGTGGATGCTTTTAGACAGGCACTTATCTCGGATAACCTGTTGCCTCAGAAACATGATGACTATCATATGTTGTTGAGATTCTTGAAAGCGAGGAAATTTGATATTGAGAAAGCAAAGCACATGTGGGCCAACATGATCCAATGGAGGAAAGAATATGGCACTGATACAATTATGGAGGATTTTAAGTTCACTGAGTTGAATGAAGTCCTGCGGTACTATCCACATGGCTATCATGGTGTAGATAAGGAAGGGAAGCCTGTTTATATTGAAAGGCTAGGTAAAGTTGATCCCAATAAGCTTATGCAAGTAACTACCATGGAAAGGTATTTGAGATACCATGTGCAGGGTTTTGAGAAAACGTTTGCTGTTAAGTTTCCTGCATGTTCTATTGCTGCAAAGAGACATATAGATTCAAGTACAACCATTTTGGATGTTCAAGGCGTGGGCTTCAAAAATCTAACCAAATCTGCACGGGAACTCATCATGAAGCTGCAGAAGATTGACGGTGACTACTATCCCGAAACATTGTGCAGAATGTTTATAATCAATGCTGGCCATGGGTTTAAGATTCTCTGGAACACTGTGAAAACATTTCTTGATCCTAAGACTACCTCAAAGATAAATGTTCTTGGAAACAAGTACCAGAATAAATTACTTGAAATCATCGATGCAAGTGAGCTGCCAGAATTTCTAGGTGGTAGTTGTACTTGTGCAGATCAAGGCGGTTGTATGAGGTCTGATAAAGGACCATGGCAAGACCCAAACATTTTGAAGATGGTTCTTAGTGGTGAAGTACAGTGTTCTAGACAAATAGTAACAGTTTCTAACGATGAGGGAACAGTGATTGAATGTGACAAGACATGTTATCCTATGATAAGAAGTAGTGATACGTCTACAGGAGAATCAGGATCTGAAGTTGAAGATATCACTTCTCCCAAAGCAAGCGGGAATTATATAAACCCCAGGTTGACTCCTGTCCATGAAGAAGCAAGATTGGTCGGTAAGACTAGTCATGCTGGCCGTCTCTCTGAGTATGATGAGTATGTTCCCATGGTTGACAAGACTGTTGATGTTGGATGGAAGGCAAAGCAAGCCACAACTCAAAACACATTTGGCTGCACAGAAAAGCTTCCATTGGTTATTGTAAGGTCTCCTGATGGAAGATGTGCATATATATGGGCTATTATAGTAGGCTTCTTTGTTGCTATCTTCGCTTTTGCTCGTTCAATTGCATGTCGCGTCAACGGAATAAAGGACGGTGACCCTGATGCTACCCAAAACATGCCTAACATGACTGTAGATTTACTACCCAAGGAGGAATCTCGTCCTCCTTCACCTGTTCCTGGCTTCACAAAGTCGGAGCTCATCTCATCTGCTTTGAAACGCCTTTGTGAGCTTGAAGAGAAGGTTGACATGCTACAGTCAAAACCTAATGTGATGCCATGCGAGAAAGAGGAACTGCTGAATGCTGCAGTTTATCGTGTGGATGCATTGGAAGCAGAACTGATTGCTACAAAGAAGGCTCTGCATGATGCTTTGATAAGACAAGAAGAACTCCTGGCATACATAGACAGACAGGAAAGAAGCGAAATGGAGCAGAAAAAGAAGTTTTGCTGGTGA 1881 0.4285 MSGPLDRFARPCFEGFYGNDERRERKSDFENSEDDRRTRIGSLKKKAINASSKFRHSLRKKSSRRKNASRSNSVSIEDVRDVKDLQAVDAFRQALISDNLLPQKHDDYHMLLRFLKARKFDIEKAKHMWANMIQWRKEYGTDTIMEDFKFTELNEVLRYYPHGYHGVDKEGKPVYIERLGKVDPNKLMQVTTMERYLRYHVQGFEKTFAVKFPACSIAAKRHIDSSTTILDVQGVGFKNLTKSARELIMKLQKIDGDYYPETLCRMFIINAGHGFKILWNTVKTFLDPKTTSKINVLGNKYQNKLLEIIDASELPEFLGGSCTCADQGGCMRSDKGPWQDPNILKMVLSGEVQCSRQIVTVSNDEGTVIECDKTCYPMIRSSDTSTGESGSEVEDITSPKASGNYINPRLTPVHEEARLVGKTSHAGRLSEYDEYVPMVDKTVDVGWKAKQATTQNTFGCTEKLPLVIVRSPDGRCAYIWAIIVGFFVAIFAFARSIACRVNGIKDGDPDATQNMPNMTVDLLPKEESRPPSPVPGFTKSELISSALKRLCELEEKVDMLQSKPNVMPCEKEELLNAAVYRVDALEAELIATKKALHDALIRQEELLAYIDRQERSEMEQKKKFCW* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g2212 626 MobiDBLite consensus disorder prediction 52 73 - -
Dod08g2212 626 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 152 326 IPR001251 -
Dod08g2212 626 CDD SEC14 153 320 IPR001251 -
Dod08g2212 626 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
Dod08g2212 626 SUPERFAMILY CRAL/TRIO domain 152 346 IPR036865 -
Dod08g2212 626 PRINTS Cellular retinaldehyde-binding protein signature 279 298 - -
Dod08g2212 626 PRINTS Cellular retinaldehyde-binding protein signature 110 132 - -
Dod08g2212 626 SUPERFAMILY CRAL/TRIO N-terminal domain 84 148 IPR036273 -
Dod08g2212 626 MobiDBLite consensus disorder prediction 52 67 - -
Dod08g2212 626 Pfam CRAL/TRIO, N-terminal domain 105 131 IPR011074 -
Dod08g2212 626 MobiDBLite consensus disorder prediction 23 42 - -
Dod08g2212 626 SMART sec14_4 152 323 IPR001251 -
Dod08g2212 626 Gene3D - 140 350 IPR036865 -
Dod08g2212 626 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 3 622 - -
Dod08g2212 626 Pfam CRAL/TRIO domain 158 320 IPR001251 -
Dod08g2212 626 Gene3D - 24 139 - -
Dod08g2212 626 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 3 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g2212 Dod-Chr8 49806920 49813129 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0526 02 6860642 6866109 Dod08g2212 08 49806920 49813129 ECH
Dod08g2212 08 49806920 49813129 Dod08g2212 08 49806920 49813129 ECH
Dod03g3179 03 64379244 64384191 Dod08g2212 08 49806920 49813129 ECH